Gene : FAD2 A. thaliana TAIR10
Primary Identifier:  ? AT3G12120 Defline:  (1 of 1) K10256 - omega-6 fatty acid desaturase (delta-12 desaturase) (FAD2)
Genomic Order:  1191 Name:  ? AT3G12120
Secondary Identifier:  ? PAC:19660115
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G12120 0.5kb upstream 0.5kb upstream 3266 true Chr3: 3860285-3863550 Arabidopsis thaliana
AT3G12120 0.5kb upstream 0.5kb upstream 500 false Chr3: 3863051-3863550 Arabidopsis thaliana
AT3G12120 0.5kb downstream 0.5kb downstream 3266 true Chr3: 3859785-3863050 Arabidopsis thaliana
AT3G12120 0.5kb downstream 0.5kb downstream 500 false Chr3: 3859785-3860284 Arabidopsis thaliana
AT3G12120 1.0kb upstream 1.0kb upstream 3766 true Chr3: 3860285-3864050 Arabidopsis thaliana
AT3G12120 1.0kb upstream 1.0kb upstream 1000 false Chr3: 3863051-3864050 Arabidopsis thaliana
AT3G12120 1.0kb downstream 1.0kb downstream 3766 true Chr3: 3859285-3863050 Arabidopsis thaliana
AT3G12120 1.0kb downstream 1.0kb downstream 1000 false Chr3: 3859285-3860284 Arabidopsis thaliana
AT3G12120 2.0kb upstream 2.0kb upstream 4766 true Chr3: 3860285-3865050 Arabidopsis thaliana
AT3G12120 2.0kb upstream 2.0kb upstream 2000 false Chr3: 3863051-3865050 Arabidopsis thaliana
AT3G12120 2.0kb downstream 2.0kb downstream 4766 true Chr3: 3858285-3863050 Arabidopsis thaliana
AT3G12120 2.0kb downstream 2.0kb downstream 2000 false Chr3: 3858285-3860284 Arabidopsis thaliana
AT3G12120 5.0kb upstream 5.0kb upstream 7766 true Chr3: 3860285-3868050 Arabidopsis thaliana
AT3G12120 5.0kb upstream 5.0kb upstream 5000 false Chr3: 3863051-3868050 Arabidopsis thaliana
AT3G12120 5.0kb downstream 5.0kb downstream 7766 true Chr3: 3855285-3863050 Arabidopsis thaliana
AT3G12120 5.0kb downstream 5.0kb downstream 5000 false Chr3: 3855285-3860284 Arabidopsis thaliana
AT3G12120 10.0kb upstream 10.0kb upstream 12766 true Chr3: 3860285-3873050 Arabidopsis thaliana
AT3G12120 10.0kb upstream 10.0kb upstream 10000 false Chr3: 3863051-3873050 Arabidopsis thaliana
AT3G12120 10.0kb downstream 10.0kb downstream 12766 true Chr3: 3850285-3863050 Arabidopsis thaliana
AT3G12120 10.0kb downstream 10.0kb downstream 10000 false Chr3: 3850285-3860284 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041215 5273 Angiosperm View MSA
122362929 5261 Brassicaceae View MSA
123833329 5264 Brassicales-Malvales View MSA
124337061 5266 SBM View MSA
124236888 5268 Malvidae View MSA
124074119 5270 Rosid View MSA
123747966 5271 Pentapetalae View MSA
122789327 5272 Eudicot View MSA
121347269 5274 Embryophyte View MSA
123426688 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 74.881     High Low
cufflinks 214.206     High  
cufflinks 100.842     High  
cufflinks 194.845     High  
cufflinks 104.099     High  
cufflinks 213.841     High  

0 Strain