Gene : AT3G11500 A. thaliana TAIR10
Defline:  (1 of 2) K11099 - small nuclear ribonucleoprotein G (SNRPG, SMG) Genomic Order:  1125
Name:  ? AT3G11500 Secondary Identifier:  ? PAC:19662802
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G11500 0.5kb upstream 0.5kb upstream 1698 true Chr3: 3621409-3623106 Arabidopsis thaliana
AT3G11500 0.5kb upstream 0.5kb upstream 500 false Chr3: 3622607-3623106 Arabidopsis thaliana
AT3G11500 0.5kb downstream 0.5kb downstream 1698 true Chr3: 3620909-3622606 Arabidopsis thaliana
AT3G11500 0.5kb downstream 0.5kb downstream 500 false Chr3: 3620909-3621408 Arabidopsis thaliana
AT3G11500 1.0kb upstream 1.0kb upstream 2198 true Chr3: 3621409-3623606 Arabidopsis thaliana
AT3G11500 1.0kb upstream 1.0kb upstream 1000 false Chr3: 3622607-3623606 Arabidopsis thaliana
AT3G11500 1.0kb downstream 1.0kb downstream 2198 true Chr3: 3620409-3622606 Arabidopsis thaliana
AT3G11500 1.0kb downstream 1.0kb downstream 1000 false Chr3: 3620409-3621408 Arabidopsis thaliana
AT3G11500 2.0kb upstream 2.0kb upstream 3198 true Chr3: 3621409-3624606 Arabidopsis thaliana
AT3G11500 2.0kb upstream 2.0kb upstream 2000 false Chr3: 3622607-3624606 Arabidopsis thaliana
AT3G11500 2.0kb downstream 2.0kb downstream 3198 true Chr3: 3619409-3622606 Arabidopsis thaliana
AT3G11500 2.0kb downstream 2.0kb downstream 2000 false Chr3: 3619409-3621408 Arabidopsis thaliana
AT3G11500 5.0kb upstream 5.0kb upstream 6198 true Chr3: 3621409-3627606 Arabidopsis thaliana
AT3G11500 5.0kb upstream 5.0kb upstream 5000 false Chr3: 3622607-3627606 Arabidopsis thaliana
AT3G11500 5.0kb downstream 5.0kb downstream 6198 true Chr3: 3616409-3622606 Arabidopsis thaliana
AT3G11500 5.0kb downstream 5.0kb downstream 5000 false Chr3: 3616409-3621408 Arabidopsis thaliana
AT3G11500 10.0kb upstream 10.0kb upstream 11198 true Chr3: 3621409-3632606 Arabidopsis thaliana
AT3G11500 10.0kb upstream 10.0kb upstream 10000 false Chr3: 3622607-3632606 Arabidopsis thaliana
AT3G11500 10.0kb downstream 10.0kb downstream 11198 true Chr3: 3611409-3622606 Arabidopsis thaliana
AT3G11500 10.0kb downstream 10.0kb downstream 10000 false Chr3: 3611409-3621408 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377990 5261 Brassicaceae View MSA
123831020 5264 Brassicales-Malvales View MSA
124342912 5266 SBM View MSA
124250166 5268 Malvidae View MSA
124063734 5270 Rosid View MSA
123743762 5271 Pentapetalae View MSA
122792328 5272 Eudicot View MSA
122043124 5273 Angiosperm View MSA
121347194 5274 Embryophyte View MSA
123426460 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 21.711        
cufflinks 41.397     High High
cufflinks 21.883        
cufflinks 36.238     High  
cufflinks 20.854        
cufflinks 40.621     High  

0 Strain