Gene : AT3G24530 A. thaliana TAIR10
Defline:  (1 of 1) PTHR24193//PTHR24193:SF70 - ANKYRIN REPEAT PROTEIN // AAA-TYPE ATPASE FAMILY PROTEIN / ANKYRIN REPEAT FAMILY PROTEIN Genomic Order:  2585
Name:  ? AT3G24530 Secondary Identifier:  ? PAC:19662455
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G24530 0.5kb upstream 0.5kb upstream 3014 true Chr3: 8945425-8948438 Arabidopsis thaliana
AT3G24530 0.5kb upstream 0.5kb upstream 500 false Chr3: 8947939-8948438 Arabidopsis thaliana
AT3G24530 0.5kb downstream 0.5kb downstream 3014 true Chr3: 8944925-8947938 Arabidopsis thaliana
AT3G24530 0.5kb downstream 0.5kb downstream 500 false Chr3: 8944925-8945424 Arabidopsis thaliana
AT3G24530 1.0kb upstream 1.0kb upstream 3514 true Chr3: 8945425-8948938 Arabidopsis thaliana
AT3G24530 1.0kb upstream 1.0kb upstream 1000 false Chr3: 8947939-8948938 Arabidopsis thaliana
AT3G24530 1.0kb downstream 1.0kb downstream 3514 true Chr3: 8944425-8947938 Arabidopsis thaliana
AT3G24530 1.0kb downstream 1.0kb downstream 1000 false Chr3: 8944425-8945424 Arabidopsis thaliana
AT3G24530 2.0kb upstream 2.0kb upstream 4514 true Chr3: 8945425-8949938 Arabidopsis thaliana
AT3G24530 2.0kb upstream 2.0kb upstream 2000 false Chr3: 8947939-8949938 Arabidopsis thaliana
AT3G24530 2.0kb downstream 2.0kb downstream 4514 true Chr3: 8943425-8947938 Arabidopsis thaliana
AT3G24530 2.0kb downstream 2.0kb downstream 2000 false Chr3: 8943425-8945424 Arabidopsis thaliana
AT3G24530 5.0kb upstream 5.0kb upstream 7514 true Chr3: 8945425-8952938 Arabidopsis thaliana
AT3G24530 5.0kb upstream 5.0kb upstream 5000 false Chr3: 8947939-8952938 Arabidopsis thaliana
AT3G24530 5.0kb downstream 5.0kb downstream 7514 true Chr3: 8940425-8947938 Arabidopsis thaliana
AT3G24530 5.0kb downstream 5.0kb downstream 5000 false Chr3: 8940425-8945424 Arabidopsis thaliana
AT3G24530 10.0kb upstream 10.0kb upstream 12514 true Chr3: 8945425-8957938 Arabidopsis thaliana
AT3G24530 10.0kb upstream 10.0kb upstream 10000 false Chr3: 8947939-8957938 Arabidopsis thaliana
AT3G24530 10.0kb downstream 10.0kb downstream 12514 true Chr3: 8935425-8947938 Arabidopsis thaliana
AT3G24530 10.0kb downstream 10.0kb downstream 10000 false Chr3: 8935425-8945424 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372907 5261 Brassicaceae View MSA
123828460 5264 Brassicales-Malvales View MSA
124341514 5266 SBM View MSA
124237288 5268 Malvidae View MSA
124062987 5270 Rosid View MSA
123751028 5271 Pentapetalae View MSA
122789998 5272 Eudicot View MSA
122041961 5273 Angiosperm View MSA
121346474 5274 Embryophyte View MSA
123380390 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 14.354        
cufflinks 36.646     High High
cufflinks 8.893       Low
cufflinks 25.801        
cufflinks 8.931       Low
cufflinks 36.797     High High

0 Strain