Gene : AT3G21190 A. thaliana TAIR10
Defline:  (1 of 2) PTHR31288//PTHR31288:SF5 - FAMILY NOT NAMED // GENOMIC DNA, CHROMOSOME 3, P1 CLONE: MXL8-RELATED Genomic Order:  2205
Name:  ? AT3G21190 Secondary Identifier:  ? PAC:19661700
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G21190 0.5kb upstream 0.5kb upstream 2867 true Chr3: 7432299-7435165 Arabidopsis thaliana
AT3G21190 0.5kb upstream 0.5kb upstream 500 false Chr3: 7434666-7435165 Arabidopsis thaliana
AT3G21190 0.5kb downstream 0.5kb downstream 2867 true Chr3: 7431799-7434665 Arabidopsis thaliana
AT3G21190 0.5kb downstream 0.5kb downstream 500 false Chr3: 7431799-7432298 Arabidopsis thaliana
AT3G21190 1.0kb upstream 1.0kb upstream 3367 true Chr3: 7432299-7435665 Arabidopsis thaliana
AT3G21190 1.0kb upstream 1.0kb upstream 1000 false Chr3: 7434666-7435665 Arabidopsis thaliana
AT3G21190 1.0kb downstream 1.0kb downstream 3367 true Chr3: 7431299-7434665 Arabidopsis thaliana
AT3G21190 1.0kb downstream 1.0kb downstream 1000 false Chr3: 7431299-7432298 Arabidopsis thaliana
AT3G21190 2.0kb upstream 2.0kb upstream 4367 true Chr3: 7432299-7436665 Arabidopsis thaliana
AT3G21190 2.0kb upstream 2.0kb upstream 2000 false Chr3: 7434666-7436665 Arabidopsis thaliana
AT3G21190 2.0kb downstream 2.0kb downstream 4367 true Chr3: 7430299-7434665 Arabidopsis thaliana
AT3G21190 2.0kb downstream 2.0kb downstream 2000 false Chr3: 7430299-7432298 Arabidopsis thaliana
AT3G21190 5.0kb upstream 5.0kb upstream 7367 true Chr3: 7432299-7439665 Arabidopsis thaliana
AT3G21190 5.0kb upstream 5.0kb upstream 5000 false Chr3: 7434666-7439665 Arabidopsis thaliana
AT3G21190 5.0kb downstream 5.0kb downstream 7367 true Chr3: 7427299-7434665 Arabidopsis thaliana
AT3G21190 5.0kb downstream 5.0kb downstream 5000 false Chr3: 7427299-7432298 Arabidopsis thaliana
AT3G21190 10.0kb upstream 10.0kb upstream 12367 true Chr3: 7432299-7444665 Arabidopsis thaliana
AT3G21190 10.0kb upstream 10.0kb upstream 10000 false Chr3: 7434666-7444665 Arabidopsis thaliana
AT3G21190 10.0kb downstream 10.0kb downstream 12367 true Chr3: 7422299-7434665 Arabidopsis thaliana
AT3G21190 10.0kb downstream 10.0kb downstream 10000 false Chr3: 7422299-7432298 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041437 5273 Angiosperm View MSA
122378918 5261 Brassicaceae View MSA
123837484 5264 Brassicales-Malvales View MSA
124346033 5266 SBM View MSA
124238517 5268 Malvidae View MSA
124067612 5270 Rosid View MSA
123741790 5271 Pentapetalae View MSA
122786128 5272 Eudicot View MSA
121350497 5274 Embryophyte View MSA
123381757 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 19.022        
cufflinks 80.688     High  
cufflinks 9.837       Low
cufflinks 68.616     High  
cufflinks 8.669       Low
cufflinks 85.296     High  

0 Strain