Gene : AT3G20340 A. thaliana TAIR10
Genomic Order:  2113 Name:  ? AT3G20340
Secondary Identifier:  ? PAC:19663114
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G20340 0.5kb upstream 0.5kb upstream 1102 true Chr3: 7092900-7094001 Arabidopsis thaliana
AT3G20340 0.5kb upstream 0.5kb upstream 500 false Chr3: 7093502-7094001 Arabidopsis thaliana
AT3G20340 0.5kb downstream 0.5kb downstream 1102 true Chr3: 7092400-7093501 Arabidopsis thaliana
AT3G20340 0.5kb downstream 0.5kb downstream 500 false Chr3: 7092400-7092899 Arabidopsis thaliana
AT3G20340 1.0kb upstream 1.0kb upstream 1602 true Chr3: 7092900-7094501 Arabidopsis thaliana
AT3G20340 1.0kb upstream 1.0kb upstream 1000 false Chr3: 7093502-7094501 Arabidopsis thaliana
AT3G20340 1.0kb downstream 1.0kb downstream 1602 true Chr3: 7091900-7093501 Arabidopsis thaliana
AT3G20340 1.0kb downstream 1.0kb downstream 1000 false Chr3: 7091900-7092899 Arabidopsis thaliana
AT3G20340 2.0kb upstream 2.0kb upstream 2602 true Chr3: 7092900-7095501 Arabidopsis thaliana
AT3G20340 2.0kb upstream 2.0kb upstream 2000 false Chr3: 7093502-7095501 Arabidopsis thaliana
AT3G20340 2.0kb downstream 2.0kb downstream 2602 true Chr3: 7090900-7093501 Arabidopsis thaliana
AT3G20340 2.0kb downstream 2.0kb downstream 2000 false Chr3: 7090900-7092899 Arabidopsis thaliana
AT3G20340 5.0kb upstream 5.0kb upstream 5602 true Chr3: 7092900-7098501 Arabidopsis thaliana
AT3G20340 5.0kb upstream 5.0kb upstream 5000 false Chr3: 7093502-7098501 Arabidopsis thaliana
AT3G20340 5.0kb downstream 5.0kb downstream 5602 true Chr3: 7087900-7093501 Arabidopsis thaliana
AT3G20340 5.0kb downstream 5.0kb downstream 5000 false Chr3: 7087900-7092899 Arabidopsis thaliana
AT3G20340 10.0kb upstream 10.0kb upstream 10602 true Chr3: 7092900-7103501 Arabidopsis thaliana
AT3G20340 10.0kb upstream 10.0kb upstream 10000 false Chr3: 7093502-7103501 Arabidopsis thaliana
AT3G20340 10.0kb downstream 10.0kb downstream 10602 true Chr3: 7082900-7093501 Arabidopsis thaliana
AT3G20340 10.0kb downstream 10.0kb downstream 10000 false Chr3: 7082900-7092899 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372757 5261 Brassicaceae View MSA
123828751 5264 Brassicales-Malvales View MSA
124321554 5266 SBM View MSA
124250030 5268 Malvidae View MSA
124068820 5270 Rosid View MSA
123742955 5271 Pentapetalae View MSA
122795546 5272 Eudicot View MSA
122045130 5273 Angiosperm View MSA
121310402 5274 Embryophyte View MSA
123347893 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.605        
cufflinks 12.049        
cufflinks 1.938        
cufflinks 18.66       High
cufflinks 1.678       Low
cufflinks 15.151        

0 Strain