Gene : NPC3 A. thaliana TAIR10
Primary Identifier:  ? AT3G03520 Defline:  (1 of 3) PTHR31956//PTHR31956:SF1 - FAMILY NOT NAMED // NON-SPECIFIC PHOSPHOLIPASE C3-RELATED
Genomic Order:  286 Name:  ? AT3G03520
Secondary Identifier:  ? PAC:19664368
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G03520 0.5kb upstream 0.5kb upstream 3248 true Chr3: 837877-841124 Arabidopsis thaliana
AT3G03520 0.5kb upstream 0.5kb upstream 500 false Chr3: 840625-841124 Arabidopsis thaliana
AT3G03520 0.5kb downstream 0.5kb downstream 3248 true Chr3: 837377-840624 Arabidopsis thaliana
AT3G03520 0.5kb downstream 0.5kb downstream 500 false Chr3: 837377-837876 Arabidopsis thaliana
AT3G03520 1.0kb upstream 1.0kb upstream 3748 true Chr3: 837877-841624 Arabidopsis thaliana
AT3G03520 1.0kb upstream 1.0kb upstream 1000 false Chr3: 840625-841624 Arabidopsis thaliana
AT3G03520 1.0kb downstream 1.0kb downstream 3748 true Chr3: 836877-840624 Arabidopsis thaliana
AT3G03520 1.0kb downstream 1.0kb downstream 1000 false Chr3: 836877-837876 Arabidopsis thaliana
AT3G03520 2.0kb upstream 2.0kb upstream 4748 true Chr3: 837877-842624 Arabidopsis thaliana
AT3G03520 2.0kb upstream 2.0kb upstream 2000 false Chr3: 840625-842624 Arabidopsis thaliana
AT3G03520 2.0kb downstream 2.0kb downstream 4748 true Chr3: 835877-840624 Arabidopsis thaliana
AT3G03520 2.0kb downstream 2.0kb downstream 2000 false Chr3: 835877-837876 Arabidopsis thaliana
AT3G03520 5.0kb upstream 5.0kb upstream 7748 true Chr3: 837877-845624 Arabidopsis thaliana
AT3G03520 5.0kb upstream 5.0kb upstream 5000 false Chr3: 840625-845624 Arabidopsis thaliana
AT3G03520 5.0kb downstream 5.0kb downstream 7748 true Chr3: 832877-840624 Arabidopsis thaliana
AT3G03520 5.0kb downstream 5.0kb downstream 5000 false Chr3: 832877-837876 Arabidopsis thaliana
AT3G03520 10.0kb upstream 10.0kb upstream 12748 true Chr3: 837877-850624 Arabidopsis thaliana
AT3G03520 10.0kb upstream 10.0kb upstream 10000 false Chr3: 840625-850624 Arabidopsis thaliana
AT3G03520 10.0kb downstream 10.0kb downstream 12748 true Chr3: 827877-840624 Arabidopsis thaliana
AT3G03520 10.0kb downstream 10.0kb downstream 10000 false Chr3: 827877-837876 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364132 5261 Brassicaceae View MSA
123828507 5264 Brassicales-Malvales View MSA
124340349 5266 SBM View MSA
124244843 5268 Malvidae View MSA
124067828 5270 Rosid View MSA
123747461 5271 Pentapetalae View MSA
122786129 5272 Eudicot View MSA
122043766 5273 Angiosperm View MSA
121350885 5274 Embryophyte View MSA
123381922 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.271        
cufflinks 52.625     High  
cufflinks 5.194        
cufflinks 61.311     High  
cufflinks 4.472        
cufflinks 71.104     High High

0 Strain