Gene : AT3G11630 A. thaliana TAIR10
Defline:  (1 of 2) PTHR10681//PTHR10681:SF108 - THIOREDOXIN PEROXIDASE // 2-CYS PEROXIREDOXIN BAS1, CHLOROPLASTIC Genomic Order:  1138
Name:  ? AT3G11630 Secondary Identifier:  ? PAC:19661864
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G11630 0.5kb upstream 0.5kb upstream 2456 true Chr3: 3671620-3674075 Arabidopsis thaliana
AT3G11630 0.5kb upstream 0.5kb upstream 500 false Chr3: 3671620-3672119 Arabidopsis thaliana
AT3G11630 0.5kb downstream 0.5kb downstream 2456 true Chr3: 3672120-3674575 Arabidopsis thaliana
AT3G11630 0.5kb downstream 0.5kb downstream 500 false Chr3: 3674076-3674575 Arabidopsis thaliana
AT3G11630 1.0kb upstream 1.0kb upstream 2956 true Chr3: 3671120-3674075 Arabidopsis thaliana
AT3G11630 1.0kb upstream 1.0kb upstream 1000 false Chr3: 3671120-3672119 Arabidopsis thaliana
AT3G11630 1.0kb downstream 1.0kb downstream 2956 true Chr3: 3672120-3675075 Arabidopsis thaliana
AT3G11630 1.0kb downstream 1.0kb downstream 1000 false Chr3: 3674076-3675075 Arabidopsis thaliana
AT3G11630 2.0kb upstream 2.0kb upstream 3956 true Chr3: 3670120-3674075 Arabidopsis thaliana
AT3G11630 2.0kb upstream 2.0kb upstream 2000 false Chr3: 3670120-3672119 Arabidopsis thaliana
AT3G11630 2.0kb downstream 2.0kb downstream 3956 true Chr3: 3672120-3676075 Arabidopsis thaliana
AT3G11630 2.0kb downstream 2.0kb downstream 2000 false Chr3: 3674076-3676075 Arabidopsis thaliana
AT3G11630 5.0kb upstream 5.0kb upstream 6956 true Chr3: 3667120-3674075 Arabidopsis thaliana
AT3G11630 5.0kb upstream 5.0kb upstream 5000 false Chr3: 3667120-3672119 Arabidopsis thaliana
AT3G11630 5.0kb downstream 5.0kb downstream 6956 true Chr3: 3672120-3679075 Arabidopsis thaliana
AT3G11630 5.0kb downstream 5.0kb downstream 5000 false Chr3: 3674076-3679075 Arabidopsis thaliana
AT3G11630 10.0kb upstream 10.0kb upstream 11956 true Chr3: 3662120-3674075 Arabidopsis thaliana
AT3G11630 10.0kb upstream 10.0kb upstream 10000 false Chr3: 3662120-3672119 Arabidopsis thaliana
AT3G11630 10.0kb downstream 10.0kb downstream 11956 true Chr3: 3672120-3684075 Arabidopsis thaliana
AT3G11630 10.0kb downstream 10.0kb downstream 10000 false Chr3: 3674076-3684075 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122379146 5261 Brassicaceae View MSA
123837147 5264 Brassicales-Malvales View MSA
124340579 5266 SBM View MSA
124236940 5268 Malvidae View MSA
124063631 5270 Rosid View MSA
123745586 5271 Pentapetalae View MSA
122792767 5272 Eudicot View MSA
122043965 5273 Angiosperm View MSA
121346960 5274 Embryophyte View MSA
123424138 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 269.25     High  
cufflinks 33.556     High  
cufflinks 353.55     High High
cufflinks 34.167     High  
cufflinks 268.859     High  
cufflinks 41.111     High  

0 Strain