Gene : AT3G07940 A. thaliana TAIR10
Defline:  (1 of 2) PTHR23180:SF249 - ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN AGD11-RELATED Genomic Order:  786
Name:  ? AT3G07940 Secondary Identifier:  ? PAC:19664751
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G07940 0.5kb upstream 0.5kb upstream 2830 true Chr3: 2528704-2531533 Arabidopsis thaliana
AT3G07940 0.5kb upstream 0.5kb upstream 500 false Chr3: 2528704-2529203 Arabidopsis thaliana
AT3G07940 0.5kb downstream 0.5kb downstream 2830 true Chr3: 2529204-2532033 Arabidopsis thaliana
AT3G07940 0.5kb downstream 0.5kb downstream 500 false Chr3: 2531534-2532033 Arabidopsis thaliana
AT3G07940 1.0kb upstream 1.0kb upstream 3330 true Chr3: 2528204-2531533 Arabidopsis thaliana
AT3G07940 1.0kb upstream 1.0kb upstream 1000 false Chr3: 2528204-2529203 Arabidopsis thaliana
AT3G07940 1.0kb downstream 1.0kb downstream 3330 true Chr3: 2529204-2532533 Arabidopsis thaliana
AT3G07940 1.0kb downstream 1.0kb downstream 1000 false Chr3: 2531534-2532533 Arabidopsis thaliana
AT3G07940 2.0kb upstream 2.0kb upstream 4330 true Chr3: 2527204-2531533 Arabidopsis thaliana
AT3G07940 2.0kb upstream 2.0kb upstream 2000 false Chr3: 2527204-2529203 Arabidopsis thaliana
AT3G07940 2.0kb downstream 2.0kb downstream 4330 true Chr3: 2529204-2533533 Arabidopsis thaliana
AT3G07940 2.0kb downstream 2.0kb downstream 2000 false Chr3: 2531534-2533533 Arabidopsis thaliana
AT3G07940 5.0kb upstream 5.0kb upstream 7330 true Chr3: 2524204-2531533 Arabidopsis thaliana
AT3G07940 5.0kb upstream 5.0kb upstream 5000 false Chr3: 2524204-2529203 Arabidopsis thaliana
AT3G07940 5.0kb downstream 5.0kb downstream 7330 true Chr3: 2529204-2536533 Arabidopsis thaliana
AT3G07940 5.0kb downstream 5.0kb downstream 5000 false Chr3: 2531534-2536533 Arabidopsis thaliana
AT3G07940 10.0kb upstream 10.0kb upstream 12330 true Chr3: 2519204-2531533 Arabidopsis thaliana
AT3G07940 10.0kb upstream 10.0kb upstream 10000 false Chr3: 2519204-2529203 Arabidopsis thaliana
AT3G07940 10.0kb downstream 10.0kb downstream 12330 true Chr3: 2529204-2541533 Arabidopsis thaliana
AT3G07940 10.0kb downstream 10.0kb downstream 10000 false Chr3: 2531534-2541533 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377651 5261 Brassicaceae View MSA
123840894 5264 Brassicales-Malvales View MSA
124339837 5266 SBM View MSA
124237301 5268 Malvidae View MSA
124063216 5270 Rosid View MSA
123748572 5271 Pentapetalae View MSA
122790257 5272 Eudicot View MSA
122045415 5273 Angiosperm View MSA
121349513 5274 Embryophyte View MSA
123381340 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 12.507       Low
cufflinks 19.766       High
cufflinks 13.568        
cufflinks 16.108        
cufflinks 15.402        
cufflinks 20.746       High

0 Strain