Gene : AT3G07690 A. thaliana TAIR10
Defline:  (1 of 2) PTHR11728:SF17 - 6-PHOSPHOGLUCONATE DEHYDROGENASE-LIKE PROTEIN Genomic Order:  761
Name:  ? AT3G07690 Secondary Identifier:  ? PAC:19665041
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Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana PWY-6118 Arabidopsis thaliana pathologic  
Athaliana PWY-7411 Arabidopsis thaliana pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G07690 0.5kb upstream 0.5kb upstream 2945 true Chr3: 2456608-2459552 Arabidopsis thaliana
AT3G07690 0.5kb upstream 0.5kb upstream 500 false Chr3: 2456608-2457107 Arabidopsis thaliana
AT3G07690 0.5kb downstream 0.5kb downstream 2945 true Chr3: 2457108-2460052 Arabidopsis thaliana
AT3G07690 0.5kb downstream 0.5kb downstream 500 false Chr3: 2459553-2460052 Arabidopsis thaliana
AT3G07690 1.0kb upstream 1.0kb upstream 3445 true Chr3: 2456108-2459552 Arabidopsis thaliana
AT3G07690 1.0kb upstream 1.0kb upstream 1000 false Chr3: 2456108-2457107 Arabidopsis thaliana
AT3G07690 1.0kb downstream 1.0kb downstream 3445 true Chr3: 2457108-2460552 Arabidopsis thaliana
AT3G07690 1.0kb downstream 1.0kb downstream 1000 false Chr3: 2459553-2460552 Arabidopsis thaliana
AT3G07690 2.0kb upstream 2.0kb upstream 4445 true Chr3: 2455108-2459552 Arabidopsis thaliana
AT3G07690 2.0kb upstream 2.0kb upstream 2000 false Chr3: 2455108-2457107 Arabidopsis thaliana
AT3G07690 2.0kb downstream 2.0kb downstream 4445 true Chr3: 2457108-2461552 Arabidopsis thaliana
AT3G07690 2.0kb downstream 2.0kb downstream 2000 false Chr3: 2459553-2461552 Arabidopsis thaliana
AT3G07690 5.0kb upstream 5.0kb upstream 7445 true Chr3: 2452108-2459552 Arabidopsis thaliana
AT3G07690 5.0kb upstream 5.0kb upstream 5000 false Chr3: 2452108-2457107 Arabidopsis thaliana
AT3G07690 5.0kb downstream 5.0kb downstream 7445 true Chr3: 2457108-2464552 Arabidopsis thaliana
AT3G07690 5.0kb downstream 5.0kb downstream 5000 false Chr3: 2459553-2464552 Arabidopsis thaliana
AT3G07690 10.0kb upstream 10.0kb upstream 12445 true Chr3: 2447108-2459552 Arabidopsis thaliana
AT3G07690 10.0kb upstream 10.0kb upstream 10000 false Chr3: 2447108-2457107 Arabidopsis thaliana
AT3G07690 10.0kb downstream 10.0kb downstream 12445 true Chr3: 2457108-2469552 Arabidopsis thaliana
AT3G07690 10.0kb downstream 10.0kb downstream 10000 false Chr3: 2459553-2469552 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122362250 5261 Brassicaceae View MSA
123798336 5264 Brassicales-Malvales View MSA
124295989 5266 SBM View MSA
124245470 5268 Malvidae View MSA
124069658 5270 Rosid View MSA
123738520 5271 Pentapetalae View MSA
122790520 5272 Eudicot View MSA
122046820 5273 Angiosperm View MSA
121349677 5274 Embryophyte View MSA
123381397 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.563        
cufflinks 8.686        
cufflinks 5.426       Low
cufflinks 10.95       High
cufflinks 5.183       Low
cufflinks 9.59        

0 Strain