Gene : AT3G05920 A. thaliana TAIR10
Defline:  (1 of 2) PTHR22814//PTHR22814:SF5 - COPPER TRANSPORT PROTEIN ATOX1-RELATED // F10A16.22 PROTEIN Genomic Order:  560
Name:  ? AT3G05920 Secondary Identifier:  ? PAC:19663400
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G05920 0.5kb upstream 0.5kb upstream 1297 true Chr3: 1768790-1770086 Arabidopsis thaliana
AT3G05920 0.5kb upstream 0.5kb upstream 500 false Chr3: 1769587-1770086 Arabidopsis thaliana
AT3G05920 0.5kb downstream 0.5kb downstream 1297 true Chr3: 1768290-1769586 Arabidopsis thaliana
AT3G05920 0.5kb downstream 0.5kb downstream 500 false Chr3: 1768290-1768789 Arabidopsis thaliana
AT3G05920 1.0kb upstream 1.0kb upstream 1797 true Chr3: 1768790-1770586 Arabidopsis thaliana
AT3G05920 1.0kb upstream 1.0kb upstream 1000 false Chr3: 1769587-1770586 Arabidopsis thaliana
AT3G05920 1.0kb downstream 1.0kb downstream 1797 true Chr3: 1767790-1769586 Arabidopsis thaliana
AT3G05920 1.0kb downstream 1.0kb downstream 1000 false Chr3: 1767790-1768789 Arabidopsis thaliana
AT3G05920 2.0kb upstream 2.0kb upstream 2797 true Chr3: 1768790-1771586 Arabidopsis thaliana
AT3G05920 2.0kb upstream 2.0kb upstream 2000 false Chr3: 1769587-1771586 Arabidopsis thaliana
AT3G05920 2.0kb downstream 2.0kb downstream 2797 true Chr3: 1766790-1769586 Arabidopsis thaliana
AT3G05920 2.0kb downstream 2.0kb downstream 2000 false Chr3: 1766790-1768789 Arabidopsis thaliana
AT3G05920 5.0kb upstream 5.0kb upstream 5797 true Chr3: 1768790-1774586 Arabidopsis thaliana
AT3G05920 5.0kb upstream 5.0kb upstream 5000 false Chr3: 1769587-1774586 Arabidopsis thaliana
AT3G05920 5.0kb downstream 5.0kb downstream 5797 true Chr3: 1763790-1769586 Arabidopsis thaliana
AT3G05920 5.0kb downstream 5.0kb downstream 5000 false Chr3: 1763790-1768789 Arabidopsis thaliana
AT3G05920 10.0kb upstream 10.0kb upstream 10797 true Chr3: 1768790-1779586 Arabidopsis thaliana
AT3G05920 10.0kb upstream 10.0kb upstream 10000 false Chr3: 1769587-1779586 Arabidopsis thaliana
AT3G05920 10.0kb downstream 10.0kb downstream 10797 true Chr3: 1758790-1769586 Arabidopsis thaliana
AT3G05920 10.0kb downstream 10.0kb downstream 10000 false Chr3: 1758790-1768789 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122360369 5261 Brassicaceae View MSA
123836260 5264 Brassicales-Malvales View MSA
124344909 5266 SBM View MSA
124253793 5268 Malvidae View MSA
124070077 5270 Rosid View MSA
123749525 5271 Pentapetalae View MSA
122797492 5272 Eudicot View MSA
122051560 5273 Angiosperm View MSA
121351529 5274 Embryophyte View MSA
123424750 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 2.626        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 8.707        
cufflinks 0.014     Low Low
cufflinks 6.819        

0 Strain