Gene : AT3G04620 A. thaliana TAIR10
Defline:  (1 of 6) PF01918 - Alba (Alba) Genomic Order:  406
Name:  ? AT3G04620 Secondary Identifier:  ? PAC:19663842
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G04620 0.5kb upstream 0.5kb upstream 1844 true Chr3: 1255526-1257369 Arabidopsis thaliana
AT3G04620 0.5kb upstream 0.5kb upstream 500 false Chr3: 1256870-1257369 Arabidopsis thaliana
AT3G04620 0.5kb downstream 0.5kb downstream 1844 true Chr3: 1255026-1256869 Arabidopsis thaliana
AT3G04620 0.5kb downstream 0.5kb downstream 500 false Chr3: 1255026-1255525 Arabidopsis thaliana
AT3G04620 1.0kb upstream 1.0kb upstream 2344 true Chr3: 1255526-1257869 Arabidopsis thaliana
AT3G04620 1.0kb upstream 1.0kb upstream 1000 false Chr3: 1256870-1257869 Arabidopsis thaliana
AT3G04620 1.0kb downstream 1.0kb downstream 2344 true Chr3: 1254526-1256869 Arabidopsis thaliana
AT3G04620 1.0kb downstream 1.0kb downstream 1000 false Chr3: 1254526-1255525 Arabidopsis thaliana
AT3G04620 2.0kb upstream 2.0kb upstream 3344 true Chr3: 1255526-1258869 Arabidopsis thaliana
AT3G04620 2.0kb upstream 2.0kb upstream 2000 false Chr3: 1256870-1258869 Arabidopsis thaliana
AT3G04620 2.0kb downstream 2.0kb downstream 3344 true Chr3: 1253526-1256869 Arabidopsis thaliana
AT3G04620 2.0kb downstream 2.0kb downstream 2000 false Chr3: 1253526-1255525 Arabidopsis thaliana
AT3G04620 5.0kb upstream 5.0kb upstream 6344 true Chr3: 1255526-1261869 Arabidopsis thaliana
AT3G04620 5.0kb upstream 5.0kb upstream 5000 false Chr3: 1256870-1261869 Arabidopsis thaliana
AT3G04620 5.0kb downstream 5.0kb downstream 6344 true Chr3: 1250526-1256869 Arabidopsis thaliana
AT3G04620 5.0kb downstream 5.0kb downstream 5000 false Chr3: 1250526-1255525 Arabidopsis thaliana
AT3G04620 10.0kb upstream 10.0kb upstream 11344 true Chr3: 1255526-1266869 Arabidopsis thaliana
AT3G04620 10.0kb upstream 10.0kb upstream 10000 false Chr3: 1256870-1266869 Arabidopsis thaliana
AT3G04620 10.0kb downstream 10.0kb downstream 11344 true Chr3: 1245526-1256869 Arabidopsis thaliana
AT3G04620 10.0kb downstream 10.0kb downstream 10000 false Chr3: 1245526-1255525 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377591 5261 Brassicaceae View MSA
123838766 5264 Brassicales-Malvales View MSA
124322497 5266 SBM View MSA
124237451 5268 Malvidae View MSA
124065942 5270 Rosid View MSA
123750255 5271 Pentapetalae View MSA
122795552 5272 Eudicot View MSA
122042167 5273 Angiosperm View MSA
121346259 5274 Embryophyte View MSA
123428257 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.565        
cufflinks 2.214        
cufflinks 1.206        
cufflinks 2.458        
cufflinks 0.833       Low
cufflinks 2.76       High

0 Strain