Gene : AT3G49320 A. thaliana TAIR10
Defline:  (1 of 2) PTHR11215//PTHR11215:SF3 - METAL DEPENDENT HYDROLASE - RELATED // SUBFAMILY NOT NAMED Genomic Order:  3930
Name:  ? AT3G49320 Secondary Identifier:  ? PAC:19660378
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G49320 0.5kb upstream 0.5kb upstream 2926 true Chr3: 18288247-18291172 Arabidopsis thaliana
AT3G49320 0.5kb upstream 0.5kb upstream 500 false Chr3: 18290673-18291172 Arabidopsis thaliana
AT3G49320 0.5kb downstream 0.5kb downstream 2926 true Chr3: 18287747-18290672 Arabidopsis thaliana
AT3G49320 0.5kb downstream 0.5kb downstream 500 false Chr3: 18287747-18288246 Arabidopsis thaliana
AT3G49320 1.0kb upstream 1.0kb upstream 3426 true Chr3: 18288247-18291672 Arabidopsis thaliana
AT3G49320 1.0kb upstream 1.0kb upstream 1000 false Chr3: 18290673-18291672 Arabidopsis thaliana
AT3G49320 1.0kb downstream 1.0kb downstream 3426 true Chr3: 18287247-18290672 Arabidopsis thaliana
AT3G49320 1.0kb downstream 1.0kb downstream 1000 false Chr3: 18287247-18288246 Arabidopsis thaliana
AT3G49320 2.0kb upstream 2.0kb upstream 4426 true Chr3: 18288247-18292672 Arabidopsis thaliana
AT3G49320 2.0kb upstream 2.0kb upstream 2000 false Chr3: 18290673-18292672 Arabidopsis thaliana
AT3G49320 2.0kb downstream 2.0kb downstream 4426 true Chr3: 18286247-18290672 Arabidopsis thaliana
AT3G49320 2.0kb downstream 2.0kb downstream 2000 false Chr3: 18286247-18288246 Arabidopsis thaliana
AT3G49320 5.0kb upstream 5.0kb upstream 7426 true Chr3: 18288247-18295672 Arabidopsis thaliana
AT3G49320 5.0kb upstream 5.0kb upstream 5000 false Chr3: 18290673-18295672 Arabidopsis thaliana
AT3G49320 5.0kb downstream 5.0kb downstream 7426 true Chr3: 18283247-18290672 Arabidopsis thaliana
AT3G49320 5.0kb downstream 5.0kb downstream 5000 false Chr3: 18283247-18288246 Arabidopsis thaliana
AT3G49320 10.0kb upstream 10.0kb upstream 12426 true Chr3: 18288247-18300672 Arabidopsis thaliana
AT3G49320 10.0kb upstream 10.0kb upstream 10000 false Chr3: 18290673-18300672 Arabidopsis thaliana
AT3G49320 10.0kb downstream 10.0kb downstream 12426 true Chr3: 18278247-18290672 Arabidopsis thaliana
AT3G49320 10.0kb downstream 10.0kb downstream 10000 false Chr3: 18278247-18288246 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361802 5261 Brassicaceae View MSA
123829417 5264 Brassicales-Malvales View MSA
124321594 5266 SBM View MSA
124240154 5268 Malvidae View MSA
124060891 5270 Rosid View MSA
123741833 5271 Pentapetalae View MSA
122789735 5272 Eudicot View MSA
122041582 5273 Angiosperm View MSA
121346472 5274 Embryophyte View MSA
123423927 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.388       High
cufflinks 2.202        
cufflinks 2.157        
cufflinks 2.212        
cufflinks 2.023        
cufflinks 2.387        

0 Strain