Gene : ERD5 A. thaliana TAIR10
Primary Identifier:  ? AT3G30775 Defline:  (1 of 2) 1.5.5.2//1.5.99.8 - Proline dehydrogenase // Transferred entry: 1.5.5.2
Genomic Order:  3197 Name:  ? AT3G30775
Secondary Identifier:  ? PAC:19661622
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Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana CITRULBIO-PWY Arabidopsis thaliana pathologic  
Athaliana PROUT-PWY Arabidopsis thaliana pathologic  
Athaliana PWY-6922 Arabidopsis thaliana pathologic  

Genomics

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Expression

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Cufflinks Score Displayer

 

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6 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G30775 0.5kb upstream 0.5kb upstream 3113 true Chr3: 12448636-12451748 Arabidopsis thaliana
AT3G30775 0.5kb upstream 0.5kb upstream 500 false Chr3: 12451249-12451748 Arabidopsis thaliana
AT3G30775 0.5kb downstream 0.5kb downstream 3113 true Chr3: 12448136-12451248 Arabidopsis thaliana
AT3G30775 0.5kb downstream 0.5kb downstream 500 false Chr3: 12448136-12448635 Arabidopsis thaliana
AT3G30775 1.0kb upstream 1.0kb upstream 3613 true Chr3: 12448636-12452248 Arabidopsis thaliana
AT3G30775 1.0kb upstream 1.0kb upstream 1000 false Chr3: 12451249-12452248 Arabidopsis thaliana
AT3G30775 1.0kb downstream 1.0kb downstream 3613 true Chr3: 12447636-12451248 Arabidopsis thaliana
AT3G30775 1.0kb downstream 1.0kb downstream 1000 false Chr3: 12447636-12448635 Arabidopsis thaliana
AT3G30775 2.0kb upstream 2.0kb upstream 4613 true Chr3: 12448636-12453248 Arabidopsis thaliana
AT3G30775 2.0kb upstream 2.0kb upstream 2000 false Chr3: 12451249-12453248 Arabidopsis thaliana
AT3G30775 2.0kb downstream 2.0kb downstream 4613 true Chr3: 12446636-12451248 Arabidopsis thaliana
AT3G30775 2.0kb downstream 2.0kb downstream 2000 false Chr3: 12446636-12448635 Arabidopsis thaliana
AT3G30775 5.0kb upstream 5.0kb upstream 7613 true Chr3: 12448636-12456248 Arabidopsis thaliana
AT3G30775 5.0kb upstream 5.0kb upstream 5000 false Chr3: 12451249-12456248 Arabidopsis thaliana
AT3G30775 5.0kb downstream 5.0kb downstream 7613 true Chr3: 12443636-12451248 Arabidopsis thaliana
AT3G30775 5.0kb downstream 5.0kb downstream 5000 false Chr3: 12443636-12448635 Arabidopsis thaliana
AT3G30775 10.0kb upstream 10.0kb upstream 12613 true Chr3: 12448636-12461248 Arabidopsis thaliana
AT3G30775 10.0kb upstream 10.0kb upstream 10000 false Chr3: 12451249-12461248 Arabidopsis thaliana
AT3G30775 10.0kb downstream 10.0kb downstream 12613 true Chr3: 12438636-12451248 Arabidopsis thaliana
AT3G30775 10.0kb downstream 10.0kb downstream 10000 false Chr3: 12438636-12448635 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373825 5261 Brassicaceae View MSA
123839513 5264 Brassicales-Malvales View MSA
124339055 5266 SBM View MSA
124243556 5268 Malvidae View MSA
124068346 5270 Rosid View MSA
123743697 5271 Pentapetalae View MSA
122792525 5272 Eudicot View MSA
122047709 5273 Angiosperm View MSA
121345691 5274 Embryophyte View MSA
123427745 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.616       Low
cufflinks 47.583     High  
cufflinks 41.249     High  
cufflinks 45.566     High  
cufflinks 25.617     High  
cufflinks 47.366     High  

0 Strain