Gene : EXPA5 A. thaliana TAIR10
Primary Identifier:  ? AT3G29030 Defline:  (1 of 35) PF01357//PF03330 - Pollen allergen (Pollen_allerg_1) // Rare lipoprotein A (RlpA)-like double-psi beta-barrel (DPBB_1)
Genomic Order:  3079 Name:  ? AT3G29030
Secondary Identifier:  ? PAC:19661974
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

5 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G29030 0.5kb upstream 0.5kb upstream 2551 true Chr3: 11011308-11013858 Arabidopsis thaliana
AT3G29030 0.5kb upstream 0.5kb upstream 500 false Chr3: 11013359-11013858 Arabidopsis thaliana
AT3G29030 0.5kb downstream 0.5kb downstream 2551 true Chr3: 11010808-11013358 Arabidopsis thaliana
AT3G29030 0.5kb downstream 0.5kb downstream 500 false Chr3: 11010808-11011307 Arabidopsis thaliana
AT3G29030 1.0kb upstream 1.0kb upstream 3051 true Chr3: 11011308-11014358 Arabidopsis thaliana
AT3G29030 1.0kb upstream 1.0kb upstream 1000 false Chr3: 11013359-11014358 Arabidopsis thaliana
AT3G29030 1.0kb downstream 1.0kb downstream 3051 true Chr3: 11010308-11013358 Arabidopsis thaliana
AT3G29030 1.0kb downstream 1.0kb downstream 1000 false Chr3: 11010308-11011307 Arabidopsis thaliana
AT3G29030 2.0kb upstream 2.0kb upstream 4051 true Chr3: 11011308-11015358 Arabidopsis thaliana
AT3G29030 2.0kb upstream 2.0kb upstream 2000 false Chr3: 11013359-11015358 Arabidopsis thaliana
AT3G29030 2.0kb downstream 2.0kb downstream 4051 true Chr3: 11009308-11013358 Arabidopsis thaliana
AT3G29030 2.0kb downstream 2.0kb downstream 2000 false Chr3: 11009308-11011307 Arabidopsis thaliana
AT3G29030 5.0kb upstream 5.0kb upstream 7051 true Chr3: 11011308-11018358 Arabidopsis thaliana
AT3G29030 5.0kb upstream 5.0kb upstream 5000 false Chr3: 11013359-11018358 Arabidopsis thaliana
AT3G29030 5.0kb downstream 5.0kb downstream 7051 true Chr3: 11006308-11013358 Arabidopsis thaliana
AT3G29030 5.0kb downstream 5.0kb downstream 5000 false Chr3: 11006308-11011307 Arabidopsis thaliana
AT3G29030 10.0kb upstream 10.0kb upstream 12051 true Chr3: 11011308-11023358 Arabidopsis thaliana
AT3G29030 10.0kb upstream 10.0kb upstream 10000 false Chr3: 11013359-11023358 Arabidopsis thaliana
AT3G29030 10.0kb downstream 10.0kb downstream 12051 true Chr3: 11001308-11013358 Arabidopsis thaliana
AT3G29030 10.0kb downstream 10.0kb downstream 10000 false Chr3: 11001308-11011307 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361583 5261 Brassicaceae View MSA
123831437 5264 Brassicales-Malvales View MSA
124338847 5266 SBM View MSA
124254378 5268 Malvidae View MSA
124070528 5270 Rosid View MSA
123753539 5271 Pentapetalae View MSA
122795213 5272 Eudicot View MSA
122043079 5273 Angiosperm View MSA
123429074 5275 Viridiplantae View MSA
121351680 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 18.884       High
cufflinks 0.052     Low Low
cufflinks 9.586        
cufflinks 0.086     Low  
cufflinks 7.91        
cufflinks 0.092     Low  

0 Strain