Gene : AT3G28510 A. thaliana TAIR10
Defline:  (1 of 4) PTHR23070:SF44 - AAA-TYPE ATPASE FAMILY PROTEIN-RELATED Genomic Order:  3019
Name:  ? AT3G28510 Secondary Identifier:  ? PAC:19661987
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G28510 0.5kb upstream 0.5kb upstream 2341 true Chr3: 10685024-10687364 Arabidopsis thaliana
AT3G28510 0.5kb upstream 0.5kb upstream 500 false Chr3: 10685024-10685523 Arabidopsis thaliana
AT3G28510 0.5kb downstream 0.5kb downstream 2341 true Chr3: 10685524-10687864 Arabidopsis thaliana
AT3G28510 0.5kb downstream 0.5kb downstream 500 false Chr3: 10687365-10687864 Arabidopsis thaliana
AT3G28510 1.0kb upstream 1.0kb upstream 2841 true Chr3: 10684524-10687364 Arabidopsis thaliana
AT3G28510 1.0kb upstream 1.0kb upstream 1000 false Chr3: 10684524-10685523 Arabidopsis thaliana
AT3G28510 1.0kb downstream 1.0kb downstream 2841 true Chr3: 10685524-10688364 Arabidopsis thaliana
AT3G28510 1.0kb downstream 1.0kb downstream 1000 false Chr3: 10687365-10688364 Arabidopsis thaliana
AT3G28510 2.0kb upstream 2.0kb upstream 3841 true Chr3: 10683524-10687364 Arabidopsis thaliana
AT3G28510 2.0kb upstream 2.0kb upstream 2000 false Chr3: 10683524-10685523 Arabidopsis thaliana
AT3G28510 2.0kb downstream 2.0kb downstream 3841 true Chr3: 10685524-10689364 Arabidopsis thaliana
AT3G28510 2.0kb downstream 2.0kb downstream 2000 false Chr3: 10687365-10689364 Arabidopsis thaliana
AT3G28510 5.0kb upstream 5.0kb upstream 6841 true Chr3: 10680524-10687364 Arabidopsis thaliana
AT3G28510 5.0kb upstream 5.0kb upstream 5000 false Chr3: 10680524-10685523 Arabidopsis thaliana
AT3G28510 5.0kb downstream 5.0kb downstream 6841 true Chr3: 10685524-10692364 Arabidopsis thaliana
AT3G28510 5.0kb downstream 5.0kb downstream 5000 false Chr3: 10687365-10692364 Arabidopsis thaliana
AT3G28510 10.0kb upstream 10.0kb upstream 11841 true Chr3: 10675524-10687364 Arabidopsis thaliana
AT3G28510 10.0kb upstream 10.0kb upstream 10000 false Chr3: 10675524-10685523 Arabidopsis thaliana
AT3G28510 10.0kb downstream 10.0kb downstream 11841 true Chr3: 10685524-10697364 Arabidopsis thaliana
AT3G28510 10.0kb downstream 10.0kb downstream 10000 false Chr3: 10687365-10697364 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122794526 5272 Eudicot View MSA
122372726 5261 Brassicaceae View MSA
123838716 5264 Brassicales-Malvales View MSA
124341066 5266 SBM View MSA
124247852 5268 Malvidae View MSA
124072543 5270 Rosid View MSA
123751074 5271 Pentapetalae View MSA
122051618 5273 Angiosperm View MSA
121350294 5274 Embryophyte View MSA
123428466 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 39.223     High  
cufflinks 4.064        
cufflinks 1.254       Low
cufflinks 59.111     High High
cufflinks 3.348        
cufflinks 17.268        

0 Strain