Gene : AT3G58270 A. thaliana TAIR10
Defline:  (1 of 2) PF00917//PF05278 - MATH domain (MATH) // Arabidopsis phospholipase-like protein (PEARLI 4) (PEARLI-4) Genomic Order:  4882
Name:  ? AT3G58270 Secondary Identifier:  ? PAC:19664971
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G58270 0.5kb upstream 0.5kb upstream 2459 true Chr3: 21575887-21578345 Arabidopsis thaliana
AT3G58270 0.5kb upstream 0.5kb upstream 500 false Chr3: 21577846-21578345 Arabidopsis thaliana
AT3G58270 0.5kb downstream 0.5kb downstream 2459 true Chr3: 21575387-21577845 Arabidopsis thaliana
AT3G58270 0.5kb downstream 0.5kb downstream 500 false Chr3: 21575387-21575886 Arabidopsis thaliana
AT3G58270 1.0kb upstream 1.0kb upstream 2959 true Chr3: 21575887-21578845 Arabidopsis thaliana
AT3G58270 1.0kb upstream 1.0kb upstream 1000 false Chr3: 21577846-21578845 Arabidopsis thaliana
AT3G58270 1.0kb downstream 1.0kb downstream 2959 true Chr3: 21574887-21577845 Arabidopsis thaliana
AT3G58270 1.0kb downstream 1.0kb downstream 1000 false Chr3: 21574887-21575886 Arabidopsis thaliana
AT3G58270 2.0kb upstream 2.0kb upstream 3959 true Chr3: 21575887-21579845 Arabidopsis thaliana
AT3G58270 2.0kb upstream 2.0kb upstream 2000 false Chr3: 21577846-21579845 Arabidopsis thaliana
AT3G58270 2.0kb downstream 2.0kb downstream 3959 true Chr3: 21573887-21577845 Arabidopsis thaliana
AT3G58270 2.0kb downstream 2.0kb downstream 2000 false Chr3: 21573887-21575886 Arabidopsis thaliana
AT3G58270 5.0kb upstream 5.0kb upstream 6959 true Chr3: 21575887-21582845 Arabidopsis thaliana
AT3G58270 5.0kb upstream 5.0kb upstream 5000 false Chr3: 21577846-21582845 Arabidopsis thaliana
AT3G58270 5.0kb downstream 5.0kb downstream 6959 true Chr3: 21570887-21577845 Arabidopsis thaliana
AT3G58270 5.0kb downstream 5.0kb downstream 5000 false Chr3: 21570887-21575886 Arabidopsis thaliana
AT3G58270 10.0kb upstream 10.0kb upstream 11959 true Chr3: 21575887-21587845 Arabidopsis thaliana
AT3G58270 10.0kb upstream 10.0kb upstream 10000 false Chr3: 21577846-21587845 Arabidopsis thaliana
AT3G58270 10.0kb downstream 10.0kb downstream 11959 true Chr3: 21565887-21577845 Arabidopsis thaliana
AT3G58270 10.0kb downstream 10.0kb downstream 10000 false Chr3: 21565887-21575886 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121665424 5273 Angiosperm View MSA
122380559 5261 Brassicaceae View MSA
123834859 5264 Brassicales-Malvales View MSA
124321972 5266 SBM View MSA
124250234 5268 Malvidae View MSA
124050250 5270 Rosid View MSA
123619785 5271 Pentapetalae View MSA
122654221 5272 Eudicot View MSA
123429159 5275 Viridiplantae View MSA
120937392 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.332        
cufflinks 6.078        
cufflinks 1.534       Low
cufflinks 5.436        
cufflinks 1.712        
cufflinks 6.4        

0 Strain