Gene : LBD29 A. thaliana TAIR10
Primary Identifier:  ? AT3G58190 Defline:  (1 of 2) PTHR31529:SF2 - LOB DOMAIN-CONTAINING PROTEIN 17-RELATED
Genomic Order:  4874 Name:  ? AT3G58190
Secondary Identifier:  ? PAC:19661567
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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G58190 0.5kb upstream 0.5kb upstream 1575 true Chr3: 21548484-21550058 Arabidopsis thaliana
AT3G58190 0.5kb upstream 0.5kb upstream 500 false Chr3: 21549559-21550058 Arabidopsis thaliana
AT3G58190 0.5kb downstream 0.5kb downstream 1575 true Chr3: 21547984-21549558 Arabidopsis thaliana
AT3G58190 0.5kb downstream 0.5kb downstream 500 false Chr3: 21547984-21548483 Arabidopsis thaliana
AT3G58190 1.0kb upstream 1.0kb upstream 2075 true Chr3: 21548484-21550558 Arabidopsis thaliana
AT3G58190 1.0kb upstream 1.0kb upstream 1000 false Chr3: 21549559-21550558 Arabidopsis thaliana
AT3G58190 1.0kb downstream 1.0kb downstream 2075 true Chr3: 21547484-21549558 Arabidopsis thaliana
AT3G58190 1.0kb downstream 1.0kb downstream 1000 false Chr3: 21547484-21548483 Arabidopsis thaliana
AT3G58190 2.0kb upstream 2.0kb upstream 3075 true Chr3: 21548484-21551558 Arabidopsis thaliana
AT3G58190 2.0kb upstream 2.0kb upstream 2000 false Chr3: 21549559-21551558 Arabidopsis thaliana
AT3G58190 2.0kb downstream 2.0kb downstream 3075 true Chr3: 21546484-21549558 Arabidopsis thaliana
AT3G58190 2.0kb downstream 2.0kb downstream 2000 false Chr3: 21546484-21548483 Arabidopsis thaliana
AT3G58190 5.0kb upstream 5.0kb upstream 6075 true Chr3: 21548484-21554558 Arabidopsis thaliana
AT3G58190 5.0kb upstream 5.0kb upstream 5000 false Chr3: 21549559-21554558 Arabidopsis thaliana
AT3G58190 5.0kb downstream 5.0kb downstream 6075 true Chr3: 21543484-21549558 Arabidopsis thaliana
AT3G58190 5.0kb downstream 5.0kb downstream 5000 false Chr3: 21543484-21548483 Arabidopsis thaliana
AT3G58190 10.0kb upstream 10.0kb upstream 11075 true Chr3: 21548484-21559558 Arabidopsis thaliana
AT3G58190 10.0kb upstream 10.0kb upstream 10000 false Chr3: 21549559-21559558 Arabidopsis thaliana
AT3G58190 10.0kb downstream 10.0kb downstream 11075 true Chr3: 21538484-21549558 Arabidopsis thaliana
AT3G58190 10.0kb downstream 10.0kb downstream 10000 false Chr3: 21538484-21548483 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029797 5273 Angiosperm View MSA
122365869 5261 Brassicaceae View MSA
123835967 5264 Brassicales-Malvales View MSA
124343312 5266 SBM View MSA
124240065 5268 Malvidae View MSA
124062010 5270 Rosid View MSA
123741408 5271 Pentapetalae View MSA
122794456 5272 Eudicot View MSA
121351593 5274 Embryophyte View MSA
123382239 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.269     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.574        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.687        

0 Strain