Gene : ESK1 A. thaliana TAIR10
Primary Identifier:  ? AT3G55990 Defline:  (1 of 2) PTHR32285//PTHR32285:SF10 - FAMILY NOT NAMED // PROTEIN ESKIMO 1
Genomic Order:  4651 Name:  ? AT3G55990
Secondary Identifier:  ? PAC:19658658
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G55990 0.5kb upstream 0.5kb upstream 3419 true Chr3: 20779815-20783233 Arabidopsis thaliana
AT3G55990 0.5kb upstream 0.5kb upstream 500 false Chr3: 20779815-20780314 Arabidopsis thaliana
AT3G55990 0.5kb downstream 0.5kb downstream 3419 true Chr3: 20780315-20783733 Arabidopsis thaliana
AT3G55990 0.5kb downstream 0.5kb downstream 500 false Chr3: 20783234-20783733 Arabidopsis thaliana
AT3G55990 1.0kb upstream 1.0kb upstream 3919 true Chr3: 20779315-20783233 Arabidopsis thaliana
AT3G55990 1.0kb upstream 1.0kb upstream 1000 false Chr3: 20779315-20780314 Arabidopsis thaliana
AT3G55990 1.0kb downstream 1.0kb downstream 3919 true Chr3: 20780315-20784233 Arabidopsis thaliana
AT3G55990 1.0kb downstream 1.0kb downstream 1000 false Chr3: 20783234-20784233 Arabidopsis thaliana
AT3G55990 2.0kb upstream 2.0kb upstream 4919 true Chr3: 20778315-20783233 Arabidopsis thaliana
AT3G55990 2.0kb upstream 2.0kb upstream 2000 false Chr3: 20778315-20780314 Arabidopsis thaliana
AT3G55990 2.0kb downstream 2.0kb downstream 4919 true Chr3: 20780315-20785233 Arabidopsis thaliana
AT3G55990 2.0kb downstream 2.0kb downstream 2000 false Chr3: 20783234-20785233 Arabidopsis thaliana
AT3G55990 5.0kb upstream 5.0kb upstream 7919 true Chr3: 20775315-20783233 Arabidopsis thaliana
AT3G55990 5.0kb upstream 5.0kb upstream 5000 false Chr3: 20775315-20780314 Arabidopsis thaliana
AT3G55990 5.0kb downstream 5.0kb downstream 7919 true Chr3: 20780315-20788233 Arabidopsis thaliana
AT3G55990 5.0kb downstream 5.0kb downstream 5000 false Chr3: 20783234-20788233 Arabidopsis thaliana
AT3G55990 10.0kb upstream 10.0kb upstream 12919 true Chr3: 20770315-20783233 Arabidopsis thaliana
AT3G55990 10.0kb upstream 10.0kb upstream 10000 false Chr3: 20770315-20780314 Arabidopsis thaliana
AT3G55990 10.0kb downstream 10.0kb downstream 12919 true Chr3: 20780315-20793233 Arabidopsis thaliana
AT3G55990 10.0kb downstream 10.0kb downstream 10000 false Chr3: 20783234-20793233 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122378136 5261 Brassicaceae View MSA
123831453 5264 Brassicales-Malvales View MSA
124340314 5266 SBM View MSA
124254292 5268 Malvidae View MSA
124066742 5270 Rosid View MSA
123749554 5271 Pentapetalae View MSA
122786005 5272 Eudicot View MSA
122051004 5273 Angiosperm View MSA
123428901 5275 Viridiplantae View MSA
121312244 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.423        
cufflinks 5.471        
cufflinks 1.408        
cufflinks 9.05        
cufflinks 1.023       Low
cufflinks 12.252       High

0 Strain