Gene : AT3G53450 A. thaliana TAIR10
Defline:  (1 of 3) PTHR31223//PTHR31223:SF17 - FAMILY NOT NAMED // CYTOKININ RIBOSIDE 5'-MONOPHOSPHATE PHOSPHORIBOHYDROLASE LOG3-RELATED Genomic Order:  4382
Name:  ? AT3G53450 Secondary Identifier:  ? PAC:19661898
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G53450 0.5kb upstream 0.5kb upstream 2954 true Chr3: 19812977-19815930 Arabidopsis thaliana
AT3G53450 0.5kb upstream 0.5kb upstream 500 false Chr3: 19815431-19815930 Arabidopsis thaliana
AT3G53450 0.5kb downstream 0.5kb downstream 2954 true Chr3: 19812477-19815430 Arabidopsis thaliana
AT3G53450 0.5kb downstream 0.5kb downstream 500 false Chr3: 19812477-19812976 Arabidopsis thaliana
AT3G53450 1.0kb upstream 1.0kb upstream 3454 true Chr3: 19812977-19816430 Arabidopsis thaliana
AT3G53450 1.0kb upstream 1.0kb upstream 1000 false Chr3: 19815431-19816430 Arabidopsis thaliana
AT3G53450 1.0kb downstream 1.0kb downstream 3454 true Chr3: 19811977-19815430 Arabidopsis thaliana
AT3G53450 1.0kb downstream 1.0kb downstream 1000 false Chr3: 19811977-19812976 Arabidopsis thaliana
AT3G53450 2.0kb upstream 2.0kb upstream 4454 true Chr3: 19812977-19817430 Arabidopsis thaliana
AT3G53450 2.0kb upstream 2.0kb upstream 2000 false Chr3: 19815431-19817430 Arabidopsis thaliana
AT3G53450 2.0kb downstream 2.0kb downstream 4454 true Chr3: 19810977-19815430 Arabidopsis thaliana
AT3G53450 2.0kb downstream 2.0kb downstream 2000 false Chr3: 19810977-19812976 Arabidopsis thaliana
AT3G53450 5.0kb upstream 5.0kb upstream 7454 true Chr3: 19812977-19820430 Arabidopsis thaliana
AT3G53450 5.0kb upstream 5.0kb upstream 5000 false Chr3: 19815431-19820430 Arabidopsis thaliana
AT3G53450 5.0kb downstream 5.0kb downstream 7454 true Chr3: 19807977-19815430 Arabidopsis thaliana
AT3G53450 5.0kb downstream 5.0kb downstream 5000 false Chr3: 19807977-19812976 Arabidopsis thaliana
AT3G53450 10.0kb upstream 10.0kb upstream 12454 true Chr3: 19812977-19825430 Arabidopsis thaliana
AT3G53450 10.0kb upstream 10.0kb upstream 10000 false Chr3: 19815431-19825430 Arabidopsis thaliana
AT3G53450 10.0kb downstream 10.0kb downstream 12454 true Chr3: 19802977-19815430 Arabidopsis thaliana
AT3G53450 10.0kb downstream 10.0kb downstream 10000 false Chr3: 19802977-19812976 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363107 5261 Brassicaceae View MSA
123836598 5264 Brassicales-Malvales View MSA
124337754 5266 SBM View MSA
124250636 5268 Malvidae View MSA
124062112 5270 Rosid View MSA
123753527 5271 Pentapetalae View MSA
122796499 5272 Eudicot View MSA
122046742 5273 Angiosperm View MSA
121351757 5274 Embryophyte View MSA
123427506 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.137     Low  
cufflinks 2.572        
cufflinks 0.114     Low  
cufflinks 3.346       High
cufflinks 0.08     Low Low
cufflinks 1.459        

0 Strain