Gene : AT3G51980 A. thaliana TAIR10
Defline:  (1 of 1) K14001 - nucleotide exchange factor SIL1 (SIL1, SLS1) Genomic Order:  4221
Name:  ? AT3G51980 Secondary Identifier:  ? PAC:19660777
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G51980 0.5kb upstream 0.5kb upstream 2481 true Chr3: 19285572-19288052 Arabidopsis thaliana
AT3G51980 0.5kb upstream 0.5kb upstream 500 false Chr3: 19287553-19288052 Arabidopsis thaliana
AT3G51980 0.5kb downstream 0.5kb downstream 2481 true Chr3: 19285072-19287552 Arabidopsis thaliana
AT3G51980 0.5kb downstream 0.5kb downstream 500 false Chr3: 19285072-19285571 Arabidopsis thaliana
AT3G51980 1.0kb upstream 1.0kb upstream 2981 true Chr3: 19285572-19288552 Arabidopsis thaliana
AT3G51980 1.0kb upstream 1.0kb upstream 1000 false Chr3: 19287553-19288552 Arabidopsis thaliana
AT3G51980 1.0kb downstream 1.0kb downstream 2981 true Chr3: 19284572-19287552 Arabidopsis thaliana
AT3G51980 1.0kb downstream 1.0kb downstream 1000 false Chr3: 19284572-19285571 Arabidopsis thaliana
AT3G51980 2.0kb upstream 2.0kb upstream 3981 true Chr3: 19285572-19289552 Arabidopsis thaliana
AT3G51980 2.0kb upstream 2.0kb upstream 2000 false Chr3: 19287553-19289552 Arabidopsis thaliana
AT3G51980 2.0kb downstream 2.0kb downstream 3981 true Chr3: 19283572-19287552 Arabidopsis thaliana
AT3G51980 2.0kb downstream 2.0kb downstream 2000 false Chr3: 19283572-19285571 Arabidopsis thaliana
AT3G51980 5.0kb upstream 5.0kb upstream 6981 true Chr3: 19285572-19292552 Arabidopsis thaliana
AT3G51980 5.0kb upstream 5.0kb upstream 5000 false Chr3: 19287553-19292552 Arabidopsis thaliana
AT3G51980 5.0kb downstream 5.0kb downstream 6981 true Chr3: 19280572-19287552 Arabidopsis thaliana
AT3G51980 5.0kb downstream 5.0kb downstream 5000 false Chr3: 19280572-19285571 Arabidopsis thaliana
AT3G51980 10.0kb upstream 10.0kb upstream 11981 true Chr3: 19285572-19297552 Arabidopsis thaliana
AT3G51980 10.0kb upstream 10.0kb upstream 10000 false Chr3: 19287553-19297552 Arabidopsis thaliana
AT3G51980 10.0kb downstream 10.0kb downstream 11981 true Chr3: 19275572-19287552 Arabidopsis thaliana
AT3G51980 10.0kb downstream 10.0kb downstream 10000 false Chr3: 19275572-19285571 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361004 5261 Brassicaceae View MSA
123833581 5264 Brassicales-Malvales View MSA
124339353 5266 SBM View MSA
124238573 5268 Malvidae View MSA
124065621 5270 Rosid View MSA
123748687 5271 Pentapetalae View MSA
122785799 5272 Eudicot View MSA
122044070 5273 Angiosperm View MSA
121347280 5274 Embryophyte View MSA
123426029 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 24.099       High
cufflinks 15.202        
cufflinks 10.637       Low
cufflinks 17.603        
cufflinks 13.238        
cufflinks 16.624        

0 Strain