Gene : AT3G51670 A. thaliana TAIR10
Defline:  (1 of 1) PTHR23324//PTHR23324:SF57 - SEC14 RELATED PROTEIN // PATELLIN-6 Genomic Order:  4189
Name:  ? AT3G51670 Secondary Identifier:  ? PAC:19661670
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G51670 0.5kb upstream 0.5kb upstream 2801 true Chr3: 19168350-19171150 Arabidopsis thaliana
AT3G51670 0.5kb upstream 0.5kb upstream 500 false Chr3: 19168350-19168849 Arabidopsis thaliana
AT3G51670 0.5kb downstream 0.5kb downstream 2801 true Chr3: 19168850-19171650 Arabidopsis thaliana
AT3G51670 0.5kb downstream 0.5kb downstream 500 false Chr3: 19171151-19171650 Arabidopsis thaliana
AT3G51670 1.0kb upstream 1.0kb upstream 3301 true Chr3: 19167850-19171150 Arabidopsis thaliana
AT3G51670 1.0kb upstream 1.0kb upstream 1000 false Chr3: 19167850-19168849 Arabidopsis thaliana
AT3G51670 1.0kb downstream 1.0kb downstream 3301 true Chr3: 19168850-19172150 Arabidopsis thaliana
AT3G51670 1.0kb downstream 1.0kb downstream 1000 false Chr3: 19171151-19172150 Arabidopsis thaliana
AT3G51670 2.0kb upstream 2.0kb upstream 4301 true Chr3: 19166850-19171150 Arabidopsis thaliana
AT3G51670 2.0kb upstream 2.0kb upstream 2000 false Chr3: 19166850-19168849 Arabidopsis thaliana
AT3G51670 2.0kb downstream 2.0kb downstream 4301 true Chr3: 19168850-19173150 Arabidopsis thaliana
AT3G51670 2.0kb downstream 2.0kb downstream 2000 false Chr3: 19171151-19173150 Arabidopsis thaliana
AT3G51670 5.0kb upstream 5.0kb upstream 7301 true Chr3: 19163850-19171150 Arabidopsis thaliana
AT3G51670 5.0kb upstream 5.0kb upstream 5000 false Chr3: 19163850-19168849 Arabidopsis thaliana
AT3G51670 5.0kb downstream 5.0kb downstream 7301 true Chr3: 19168850-19176150 Arabidopsis thaliana
AT3G51670 5.0kb downstream 5.0kb downstream 5000 false Chr3: 19171151-19176150 Arabidopsis thaliana
AT3G51670 10.0kb upstream 10.0kb upstream 12301 true Chr3: 19158850-19171150 Arabidopsis thaliana
AT3G51670 10.0kb upstream 10.0kb upstream 10000 false Chr3: 19158850-19168849 Arabidopsis thaliana
AT3G51670 10.0kb downstream 10.0kb downstream 12301 true Chr3: 19168850-19181150 Arabidopsis thaliana
AT3G51670 10.0kb downstream 10.0kb downstream 10000 false Chr3: 19171151-19181150 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122362041 5261 Brassicaceae View MSA
123841619 5264 Brassicales-Malvales View MSA
124343637 5266 SBM View MSA
124241285 5268 Malvidae View MSA
124061796 5270 Rosid View MSA
123743132 5271 Pentapetalae View MSA
122791102 5272 Eudicot View MSA
122041673 5273 Angiosperm View MSA
123429024 5275 Viridiplantae View MSA
121350368 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 27.473        
cufflinks 78.071     High  
cufflinks 16.766       Low
cufflinks 57.787     High  
cufflinks 17.089       Low
cufflinks 91.865     High High

0 Strain