Gene : AT3G51930 A. thaliana TAIR10
Defline:  (1 of 1) PTHR22844//PTHR22844:SF223 - F-BOX AND WD40 DOMAIN PROTEIN // SUBFAMILY NOT NAMED Genomic Order:  4216
Name:  ? AT3G51930 Secondary Identifier:  ? PAC:19659124
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G51930 0.5kb upstream 0.5kb upstream 1941 true Chr3: 19271124-19273064 Arabidopsis thaliana
AT3G51930 0.5kb upstream 0.5kb upstream 500 false Chr3: 19271124-19271623 Arabidopsis thaliana
AT3G51930 0.5kb downstream 0.5kb downstream 1941 true Chr3: 19271624-19273564 Arabidopsis thaliana
AT3G51930 0.5kb downstream 0.5kb downstream 500 false Chr3: 19273065-19273564 Arabidopsis thaliana
AT3G51930 1.0kb upstream 1.0kb upstream 2441 true Chr3: 19270624-19273064 Arabidopsis thaliana
AT3G51930 1.0kb upstream 1.0kb upstream 1000 false Chr3: 19270624-19271623 Arabidopsis thaliana
AT3G51930 1.0kb downstream 1.0kb downstream 2441 true Chr3: 19271624-19274064 Arabidopsis thaliana
AT3G51930 1.0kb downstream 1.0kb downstream 1000 false Chr3: 19273065-19274064 Arabidopsis thaliana
AT3G51930 2.0kb upstream 2.0kb upstream 3441 true Chr3: 19269624-19273064 Arabidopsis thaliana
AT3G51930 2.0kb upstream 2.0kb upstream 2000 false Chr3: 19269624-19271623 Arabidopsis thaliana
AT3G51930 2.0kb downstream 2.0kb downstream 3441 true Chr3: 19271624-19275064 Arabidopsis thaliana
AT3G51930 2.0kb downstream 2.0kb downstream 2000 false Chr3: 19273065-19275064 Arabidopsis thaliana
AT3G51930 5.0kb upstream 5.0kb upstream 6441 true Chr3: 19266624-19273064 Arabidopsis thaliana
AT3G51930 5.0kb upstream 5.0kb upstream 5000 false Chr3: 19266624-19271623 Arabidopsis thaliana
AT3G51930 5.0kb downstream 5.0kb downstream 6441 true Chr3: 19271624-19278064 Arabidopsis thaliana
AT3G51930 5.0kb downstream 5.0kb downstream 5000 false Chr3: 19273065-19278064 Arabidopsis thaliana
AT3G51930 10.0kb upstream 10.0kb upstream 11441 true Chr3: 19261624-19273064 Arabidopsis thaliana
AT3G51930 10.0kb upstream 10.0kb upstream 10000 false Chr3: 19261624-19271623 Arabidopsis thaliana
AT3G51930 10.0kb downstream 10.0kb downstream 11441 true Chr3: 19271624-19283064 Arabidopsis thaliana
AT3G51930 10.0kb downstream 10.0kb downstream 10000 false Chr3: 19273065-19283064 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122362585 5261 Brassicaceae View MSA
123840486 5264 Brassicales-Malvales View MSA
124341932 5266 SBM View MSA
124253665 5268 Malvidae View MSA
124065693 5270 Rosid View MSA
123747127 5271 Pentapetalae View MSA
122788104 5272 Eudicot View MSA
122046676 5273 Angiosperm View MSA
121349705 5274 Embryophyte View MSA
123428719 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.852        
cufflinks 4.8        
cufflinks 1.208        
cufflinks 4.171        
cufflinks 0.75       Low
cufflinks 8.547       High

0 Strain