Gene : AT3G51400 A. thaliana TAIR10
Defline:  (1 of 18) PF03087 - Arabidopsis protein of unknown function (DUF241) Genomic Order:  4158
Name:  ? AT3G51400 Secondary Identifier:  ? PAC:19658615
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G51400 0.5kb upstream 0.5kb upstream 1606 true Chr3: 19077850-19079455 Arabidopsis thaliana
AT3G51400 0.5kb upstream 0.5kb upstream 500 false Chr3: 19078956-19079455 Arabidopsis thaliana
AT3G51400 0.5kb downstream 0.5kb downstream 1606 true Chr3: 19077350-19078955 Arabidopsis thaliana
AT3G51400 0.5kb downstream 0.5kb downstream 500 false Chr3: 19077350-19077849 Arabidopsis thaliana
AT3G51400 1.0kb upstream 1.0kb upstream 2106 true Chr3: 19077850-19079955 Arabidopsis thaliana
AT3G51400 1.0kb upstream 1.0kb upstream 1000 false Chr3: 19078956-19079955 Arabidopsis thaliana
AT3G51400 1.0kb downstream 1.0kb downstream 2106 true Chr3: 19076850-19078955 Arabidopsis thaliana
AT3G51400 1.0kb downstream 1.0kb downstream 1000 false Chr3: 19076850-19077849 Arabidopsis thaliana
AT3G51400 2.0kb upstream 2.0kb upstream 3106 true Chr3: 19077850-19080955 Arabidopsis thaliana
AT3G51400 2.0kb upstream 2.0kb upstream 2000 false Chr3: 19078956-19080955 Arabidopsis thaliana
AT3G51400 2.0kb downstream 2.0kb downstream 3106 true Chr3: 19075850-19078955 Arabidopsis thaliana
AT3G51400 2.0kb downstream 2.0kb downstream 2000 false Chr3: 19075850-19077849 Arabidopsis thaliana
AT3G51400 5.0kb upstream 5.0kb upstream 6106 true Chr3: 19077850-19083955 Arabidopsis thaliana
AT3G51400 5.0kb upstream 5.0kb upstream 5000 false Chr3: 19078956-19083955 Arabidopsis thaliana
AT3G51400 5.0kb downstream 5.0kb downstream 6106 true Chr3: 19072850-19078955 Arabidopsis thaliana
AT3G51400 5.0kb downstream 5.0kb downstream 5000 false Chr3: 19072850-19077849 Arabidopsis thaliana
AT3G51400 10.0kb upstream 10.0kb upstream 11106 true Chr3: 19077850-19088955 Arabidopsis thaliana
AT3G51400 10.0kb upstream 10.0kb upstream 10000 false Chr3: 19078956-19088955 Arabidopsis thaliana
AT3G51400 10.0kb downstream 10.0kb downstream 11106 true Chr3: 19067850-19078955 Arabidopsis thaliana
AT3G51400 10.0kb downstream 10.0kb downstream 10000 false Chr3: 19067850-19077849 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363711 5261 Brassicaceae View MSA
123798596 5264 Brassicales-Malvales View MSA
124296209 5266 SBM View MSA
124148426 5268 Malvidae View MSA
123874421 5270 Rosid View MSA
123753428 5271 Pentapetalae View MSA
122797760 5272 Eudicot View MSA
122043809 5273 Angiosperm View MSA
121310191 5274 Embryophyte View MSA
123347751 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.093        
cufflinks 0.247     Low  
cufflinks 1.795        
cufflinks 0.049     Low Low
cufflinks 1.583        
cufflinks 0.043     Low Low

0 Strain