Gene : UGT80B1 A. thaliana TAIR10
Primary Identifier:  ? AT1G43620 Defline:  (1 of 1) PTHR11926//PTHR11926:SF117 - GLUCOSYL/GLUCURONOSYL TRANSFERASES // STEROL 3-BETA-GLUCOSYLTRANSFERASE UGT80B1
Genomic Order:  3617 Name:  ? AT1G43620
Secondary Identifier:  ? PAC:19657363
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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G43620 0.5kb upstream 0.5kb upstream 5289 true Chr1: 16425412-16430700 Arabidopsis thaliana
AT1G43620 0.5kb upstream 0.5kb upstream 500 false Chr1: 16430201-16430700 Arabidopsis thaliana
AT1G43620 0.5kb downstream 0.5kb downstream 5289 true Chr1: 16424912-16430200 Arabidopsis thaliana
AT1G43620 0.5kb downstream 0.5kb downstream 500 false Chr1: 16424912-16425411 Arabidopsis thaliana
AT1G43620 1.0kb upstream 1.0kb upstream 5789 true Chr1: 16425412-16431200 Arabidopsis thaliana
AT1G43620 1.0kb upstream 1.0kb upstream 1000 false Chr1: 16430201-16431200 Arabidopsis thaliana
AT1G43620 1.0kb downstream 1.0kb downstream 5789 true Chr1: 16424412-16430200 Arabidopsis thaliana
AT1G43620 1.0kb downstream 1.0kb downstream 1000 false Chr1: 16424412-16425411 Arabidopsis thaliana
AT1G43620 2.0kb upstream 2.0kb upstream 6789 true Chr1: 16425412-16432200 Arabidopsis thaliana
AT1G43620 2.0kb upstream 2.0kb upstream 2000 false Chr1: 16430201-16432200 Arabidopsis thaliana
AT1G43620 2.0kb downstream 2.0kb downstream 6789 true Chr1: 16423412-16430200 Arabidopsis thaliana
AT1G43620 2.0kb downstream 2.0kb downstream 2000 false Chr1: 16423412-16425411 Arabidopsis thaliana
AT1G43620 5.0kb upstream 5.0kb upstream 9789 true Chr1: 16425412-16435200 Arabidopsis thaliana
AT1G43620 5.0kb upstream 5.0kb upstream 5000 false Chr1: 16430201-16435200 Arabidopsis thaliana
AT1G43620 5.0kb downstream 5.0kb downstream 9789 true Chr1: 16420412-16430200 Arabidopsis thaliana
AT1G43620 5.0kb downstream 5.0kb downstream 5000 false Chr1: 16420412-16425411 Arabidopsis thaliana
AT1G43620 10.0kb upstream 10.0kb upstream 14789 true Chr1: 16425412-16440200 Arabidopsis thaliana
AT1G43620 10.0kb upstream 10.0kb upstream 10000 false Chr1: 16430201-16440200 Arabidopsis thaliana
AT1G43620 10.0kb downstream 10.0kb downstream 14789 true Chr1: 16415412-16430200 Arabidopsis thaliana
AT1G43620 10.0kb downstream 10.0kb downstream 10000 false Chr1: 16415412-16425411 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026166 5273 Angiosperm View MSA
122360267 5261 Brassicaceae View MSA
123831160 5264 Brassicales-Malvales View MSA
124338634 5266 SBM View MSA
124241351 5268 Malvidae View MSA
124060571 5270 Rosid View MSA
123748322 5271 Pentapetalae View MSA
122785653 5272 Eudicot View MSA
121349379 5274 Embryophyte View MSA
123425630 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.603        
cufflinks 2.533        
cufflinks 3.898        
cufflinks 2.542        
cufflinks 4.139       High
cufflinks 2.442       Low

0 Strain