Gene : STN7 A. thaliana TAIR10
Primary Identifier:  ? AT1G68830 Defline:  (1 of 1) PTHR11584//PTHR11584:SF316 - SERINE/THREONINE PROTEIN KINASE // SERINE/THREONINE-PROTEIN KINASE STN7, CHLOROPLASTIC
Genomic Order:  5837 Name:  ? AT1G68830
Secondary Identifier:  ? PAC:19655902
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G68830 0.5kb upstream 0.5kb upstream 3606 true Chr1: 25872445-25876050 Arabidopsis thaliana
AT1G68830 0.5kb upstream 0.5kb upstream 500 false Chr1: 25875551-25876050 Arabidopsis thaliana
AT1G68830 0.5kb downstream 0.5kb downstream 3606 true Chr1: 25871945-25875550 Arabidopsis thaliana
AT1G68830 0.5kb downstream 0.5kb downstream 500 false Chr1: 25871945-25872444 Arabidopsis thaliana
AT1G68830 1.0kb upstream 1.0kb upstream 4106 true Chr1: 25872445-25876550 Arabidopsis thaliana
AT1G68830 1.0kb upstream 1.0kb upstream 1000 false Chr1: 25875551-25876550 Arabidopsis thaliana
AT1G68830 1.0kb downstream 1.0kb downstream 4106 true Chr1: 25871445-25875550 Arabidopsis thaliana
AT1G68830 1.0kb downstream 1.0kb downstream 1000 false Chr1: 25871445-25872444 Arabidopsis thaliana
AT1G68830 2.0kb upstream 2.0kb upstream 5106 true Chr1: 25872445-25877550 Arabidopsis thaliana
AT1G68830 2.0kb upstream 2.0kb upstream 2000 false Chr1: 25875551-25877550 Arabidopsis thaliana
AT1G68830 2.0kb downstream 2.0kb downstream 5106 true Chr1: 25870445-25875550 Arabidopsis thaliana
AT1G68830 2.0kb downstream 2.0kb downstream 2000 false Chr1: 25870445-25872444 Arabidopsis thaliana
AT1G68830 5.0kb upstream 5.0kb upstream 8106 true Chr1: 25872445-25880550 Arabidopsis thaliana
AT1G68830 5.0kb upstream 5.0kb upstream 5000 false Chr1: 25875551-25880550 Arabidopsis thaliana
AT1G68830 5.0kb downstream 5.0kb downstream 8106 true Chr1: 25867445-25875550 Arabidopsis thaliana
AT1G68830 5.0kb downstream 5.0kb downstream 5000 false Chr1: 25867445-25872444 Arabidopsis thaliana
AT1G68830 10.0kb upstream 10.0kb upstream 13106 true Chr1: 25872445-25885550 Arabidopsis thaliana
AT1G68830 10.0kb upstream 10.0kb upstream 10000 false Chr1: 25875551-25885550 Arabidopsis thaliana
AT1G68830 10.0kb downstream 10.0kb downstream 13106 true Chr1: 25862445-25875550 Arabidopsis thaliana
AT1G68830 10.0kb downstream 10.0kb downstream 10000 false Chr1: 25862445-25872444 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366403 5261 Brassicaceae View MSA
123830319 5264 Brassicales-Malvales View MSA
124337055 5266 SBM View MSA
124239166 5268 Malvidae View MSA
124065360 5270 Rosid View MSA
123738551 5271 Pentapetalae View MSA
122788094 5272 Eudicot View MSA
122045245 5273 Angiosperm View MSA
121346895 5274 Embryophyte View MSA
123424857 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 23.682        
cufflinks 2.206        
cufflinks 34.366     High  
cufflinks 2.365        
cufflinks 49.896     High High
cufflinks 1.495       Low

0 Strain