Gene : AT1G12930 A. thaliana TAIR10
Defline:  (1 of 1) PTHR12363:SF27 - EXPORTIN 1-LIKE PROTEIN DOMAIN-CONTAINING PROTEIN Genomic Order:  1283
Name:  ? AT1G12930 Secondary Identifier:  ? PAC:19649877
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G12930 0.5kb upstream 0.5kb upstream 7731 true Chr1: 4398375-4406105 Arabidopsis thaliana
AT1G12930 0.5kb upstream 0.5kb upstream 500 false Chr1: 4405606-4406105 Arabidopsis thaliana
AT1G12930 0.5kb downstream 0.5kb downstream 7731 true Chr1: 4397875-4405605 Arabidopsis thaliana
AT1G12930 0.5kb downstream 0.5kb downstream 500 false Chr1: 4397875-4398374 Arabidopsis thaliana
AT1G12930 1.0kb upstream 1.0kb upstream 8231 true Chr1: 4398375-4406605 Arabidopsis thaliana
AT1G12930 1.0kb upstream 1.0kb upstream 1000 false Chr1: 4405606-4406605 Arabidopsis thaliana
AT1G12930 1.0kb downstream 1.0kb downstream 8231 true Chr1: 4397375-4405605 Arabidopsis thaliana
AT1G12930 1.0kb downstream 1.0kb downstream 1000 false Chr1: 4397375-4398374 Arabidopsis thaliana
AT1G12930 2.0kb upstream 2.0kb upstream 9231 true Chr1: 4398375-4407605 Arabidopsis thaliana
AT1G12930 2.0kb upstream 2.0kb upstream 2000 false Chr1: 4405606-4407605 Arabidopsis thaliana
AT1G12930 2.0kb downstream 2.0kb downstream 9231 true Chr1: 4396375-4405605 Arabidopsis thaliana
AT1G12930 2.0kb downstream 2.0kb downstream 2000 false Chr1: 4396375-4398374 Arabidopsis thaliana
AT1G12930 5.0kb upstream 5.0kb upstream 12231 true Chr1: 4398375-4410605 Arabidopsis thaliana
AT1G12930 5.0kb upstream 5.0kb upstream 5000 false Chr1: 4405606-4410605 Arabidopsis thaliana
AT1G12930 5.0kb downstream 5.0kb downstream 12231 true Chr1: 4393375-4405605 Arabidopsis thaliana
AT1G12930 5.0kb downstream 5.0kb downstream 5000 false Chr1: 4393375-4398374 Arabidopsis thaliana
AT1G12930 10.0kb upstream 10.0kb upstream 17231 true Chr1: 4398375-4415605 Arabidopsis thaliana
AT1G12930 10.0kb upstream 10.0kb upstream 10000 false Chr1: 4405606-4415605 Arabidopsis thaliana
AT1G12930 10.0kb downstream 10.0kb downstream 17231 true Chr1: 4388375-4405605 Arabidopsis thaliana
AT1G12930 10.0kb downstream 10.0kb downstream 10000 false Chr1: 4388375-4398374 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374154 5261 Brassicaceae View MSA
123829476 5264 Brassicales-Malvales View MSA
124340925 5266 SBM View MSA
124237952 5268 Malvidae View MSA
124067010 5270 Rosid View MSA
123737335 5271 Pentapetalae View MSA
122791507 5272 Eudicot View MSA
122047073 5273 Angiosperm View MSA
121346085 5274 Embryophyte View MSA
123427248 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.759        
cufflinks 8.044       High
cufflinks 3.754        
cufflinks 7.215        
cufflinks 3.95        
cufflinks 6.295        

0 Strain