Gene : AT1G12270 A. thaliana TAIR10
Defline:  (1 of 3) K09553 - stress-induced-phosphoprotein 1 (STIP1) Genomic Order:  1212
Name:  ? AT1G12270 Secondary Identifier:  ? PAC:19652098
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G12270 0.5kb upstream 0.5kb upstream 3201 true Chr1: 4171575-4174775 Arabidopsis thaliana
AT1G12270 0.5kb upstream 0.5kb upstream 500 false Chr1: 4171575-4172074 Arabidopsis thaliana
AT1G12270 0.5kb downstream 0.5kb downstream 3201 true Chr1: 4172075-4175275 Arabidopsis thaliana
AT1G12270 0.5kb downstream 0.5kb downstream 500 false Chr1: 4174776-4175275 Arabidopsis thaliana
AT1G12270 1.0kb upstream 1.0kb upstream 3701 true Chr1: 4171075-4174775 Arabidopsis thaliana
AT1G12270 1.0kb upstream 1.0kb upstream 1000 false Chr1: 4171075-4172074 Arabidopsis thaliana
AT1G12270 1.0kb downstream 1.0kb downstream 3701 true Chr1: 4172075-4175775 Arabidopsis thaliana
AT1G12270 1.0kb downstream 1.0kb downstream 1000 false Chr1: 4174776-4175775 Arabidopsis thaliana
AT1G12270 2.0kb upstream 2.0kb upstream 4701 true Chr1: 4170075-4174775 Arabidopsis thaliana
AT1G12270 2.0kb upstream 2.0kb upstream 2000 false Chr1: 4170075-4172074 Arabidopsis thaliana
AT1G12270 2.0kb downstream 2.0kb downstream 4701 true Chr1: 4172075-4176775 Arabidopsis thaliana
AT1G12270 2.0kb downstream 2.0kb downstream 2000 false Chr1: 4174776-4176775 Arabidopsis thaliana
AT1G12270 5.0kb upstream 5.0kb upstream 7701 true Chr1: 4167075-4174775 Arabidopsis thaliana
AT1G12270 5.0kb upstream 5.0kb upstream 5000 false Chr1: 4167075-4172074 Arabidopsis thaliana
AT1G12270 5.0kb downstream 5.0kb downstream 7701 true Chr1: 4172075-4179775 Arabidopsis thaliana
AT1G12270 5.0kb downstream 5.0kb downstream 5000 false Chr1: 4174776-4179775 Arabidopsis thaliana
AT1G12270 10.0kb upstream 10.0kb upstream 12701 true Chr1: 4162075-4174775 Arabidopsis thaliana
AT1G12270 10.0kb upstream 10.0kb upstream 10000 false Chr1: 4162075-4172074 Arabidopsis thaliana
AT1G12270 10.0kb downstream 10.0kb downstream 12701 true Chr1: 4172075-4184775 Arabidopsis thaliana
AT1G12270 10.0kb downstream 10.0kb downstream 10000 false Chr1: 4174776-4184775 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122376121 5261 Brassicaceae View MSA
123801146 5264 Brassicales-Malvales View MSA
124298483 5266 SBM View MSA
124248162 5268 Malvidae View MSA
124050195 5270 Rosid View MSA
123742862 5271 Pentapetalae View MSA
122790391 5272 Eudicot View MSA
122044378 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121343980 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 17.079        
cufflinks 19.696        
cufflinks 15.669       Low
cufflinks 21.49        
cufflinks 15.669       Low
cufflinks 23.917       High

0 Strain