Gene : AT1G12020 A. thaliana TAIR10
Defline:  (1 of 2) PTHR31903:SF6 - F12F1.11-RELATED Genomic Order:  1184
Name:  ? AT1G12020 Secondary Identifier:  ? PAC:19650880
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G12020 0.5kb upstream 0.5kb upstream 1376 true Chr1: 4062462-4063837 Arabidopsis thaliana
AT1G12020 0.5kb upstream 0.5kb upstream 500 false Chr1: 4063338-4063837 Arabidopsis thaliana
AT1G12020 0.5kb downstream 0.5kb downstream 1376 true Chr1: 4061962-4063337 Arabidopsis thaliana
AT1G12020 0.5kb downstream 0.5kb downstream 500 false Chr1: 4061962-4062461 Arabidopsis thaliana
AT1G12020 1.0kb upstream 1.0kb upstream 1876 true Chr1: 4062462-4064337 Arabidopsis thaliana
AT1G12020 1.0kb upstream 1.0kb upstream 1000 false Chr1: 4063338-4064337 Arabidopsis thaliana
AT1G12020 1.0kb downstream 1.0kb downstream 1876 true Chr1: 4061462-4063337 Arabidopsis thaliana
AT1G12020 1.0kb downstream 1.0kb downstream 1000 false Chr1: 4061462-4062461 Arabidopsis thaliana
AT1G12020 2.0kb upstream 2.0kb upstream 2876 true Chr1: 4062462-4065337 Arabidopsis thaliana
AT1G12020 2.0kb upstream 2.0kb upstream 2000 false Chr1: 4063338-4065337 Arabidopsis thaliana
AT1G12020 2.0kb downstream 2.0kb downstream 2876 true Chr1: 4060462-4063337 Arabidopsis thaliana
AT1G12020 2.0kb downstream 2.0kb downstream 2000 false Chr1: 4060462-4062461 Arabidopsis thaliana
AT1G12020 5.0kb upstream 5.0kb upstream 5876 true Chr1: 4062462-4068337 Arabidopsis thaliana
AT1G12020 5.0kb upstream 5.0kb upstream 5000 false Chr1: 4063338-4068337 Arabidopsis thaliana
AT1G12020 5.0kb downstream 5.0kb downstream 5876 true Chr1: 4057462-4063337 Arabidopsis thaliana
AT1G12020 5.0kb downstream 5.0kb downstream 5000 false Chr1: 4057462-4062461 Arabidopsis thaliana
AT1G12020 10.0kb upstream 10.0kb upstream 10876 true Chr1: 4062462-4073337 Arabidopsis thaliana
AT1G12020 10.0kb upstream 10.0kb upstream 10000 false Chr1: 4063338-4073337 Arabidopsis thaliana
AT1G12020 10.0kb downstream 10.0kb downstream 10876 true Chr1: 4052462-4063337 Arabidopsis thaliana
AT1G12020 10.0kb downstream 10.0kb downstream 10000 false Chr1: 4052462-4062461 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374650 5261 Brassicaceae View MSA
123839342 5264 Brassicales-Malvales View MSA
124343761 5266 SBM View MSA
124247349 5268 Malvidae View MSA
124071789 5270 Rosid View MSA
123751715 5271 Pentapetalae View MSA
122793520 5272 Eudicot View MSA
122049689 5273 Angiosperm View MSA
121311543 5274 Embryophyte View MSA
123348826 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.008        
cufflinks 5.066        
cufflinks 9.335       High
cufflinks 5.24        
cufflinks 6.16        
cufflinks 3.543       Low

0 Strain