Gene : AT1G11905 A. thaliana TAIR10
Defline:  (1 of 2) PTHR12701//PTHR12701:SF18 - BCR-ASSOCIATED PROTEIN, BAP // 4D656-RELATED Genomic Order:  1170
Name:  ? AT1G11905 Secondary Identifier:  ? PAC:19655165
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G11905 0.5kb upstream 0.5kb upstream 2194 true Chr1: 4014347-4016540 Arabidopsis thaliana
AT1G11905 0.5kb upstream 0.5kb upstream 500 false Chr1: 4014347-4014846 Arabidopsis thaliana
AT1G11905 0.5kb downstream 0.5kb downstream 2194 true Chr1: 4014847-4017040 Arabidopsis thaliana
AT1G11905 0.5kb downstream 0.5kb downstream 500 false Chr1: 4016541-4017040 Arabidopsis thaliana
AT1G11905 1.0kb upstream 1.0kb upstream 2694 true Chr1: 4013847-4016540 Arabidopsis thaliana
AT1G11905 1.0kb upstream 1.0kb upstream 1000 false Chr1: 4013847-4014846 Arabidopsis thaliana
AT1G11905 1.0kb downstream 1.0kb downstream 2694 true Chr1: 4014847-4017540 Arabidopsis thaliana
AT1G11905 1.0kb downstream 1.0kb downstream 1000 false Chr1: 4016541-4017540 Arabidopsis thaliana
AT1G11905 2.0kb upstream 2.0kb upstream 3694 true Chr1: 4012847-4016540 Arabidopsis thaliana
AT1G11905 2.0kb upstream 2.0kb upstream 2000 false Chr1: 4012847-4014846 Arabidopsis thaliana
AT1G11905 2.0kb downstream 2.0kb downstream 3694 true Chr1: 4014847-4018540 Arabidopsis thaliana
AT1G11905 2.0kb downstream 2.0kb downstream 2000 false Chr1: 4016541-4018540 Arabidopsis thaliana
AT1G11905 5.0kb upstream 5.0kb upstream 6694 true Chr1: 4009847-4016540 Arabidopsis thaliana
AT1G11905 5.0kb upstream 5.0kb upstream 5000 false Chr1: 4009847-4014846 Arabidopsis thaliana
AT1G11905 5.0kb downstream 5.0kb downstream 6694 true Chr1: 4014847-4021540 Arabidopsis thaliana
AT1G11905 5.0kb downstream 5.0kb downstream 5000 false Chr1: 4016541-4021540 Arabidopsis thaliana
AT1G11905 10.0kb upstream 10.0kb upstream 11694 true Chr1: 4004847-4016540 Arabidopsis thaliana
AT1G11905 10.0kb upstream 10.0kb upstream 10000 false Chr1: 4004847-4014846 Arabidopsis thaliana
AT1G11905 10.0kb downstream 10.0kb downstream 11694 true Chr1: 4014847-4026540 Arabidopsis thaliana
AT1G11905 10.0kb downstream 10.0kb downstream 10000 false Chr1: 4016541-4026540 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122362044 5261 Brassicaceae View MSA
123838271 5264 Brassicales-Malvales View MSA
124344716 5266 SBM View MSA
124244286 5268 Malvidae View MSA
124069525 5270 Rosid View MSA
123738929 5271 Pentapetalae View MSA
122789620 5272 Eudicot View MSA
122043200 5273 Angiosperm View MSA
121347866 5274 Embryophyte View MSA
123426905 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.229        
cufflinks 7.214        
cufflinks 3.056       Low
cufflinks 6.976        
cufflinks 3.546       Low
cufflinks 7.051        

0 Strain