Gene : SD1-13 A. thaliana TAIR10
Primary Identifier:  ? AT1G11350 Defline:  (1 of 3) PTHR27002//PTHR27002:SF157 - FAMILY NOT NAMED // G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-13
Genomic Order:  1106 Name:  ? AT1G11350
Secondary Identifier:  ? PAC:19657895
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Expression

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3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G11350 0.5kb upstream 0.5kb upstream 3715 true Chr1: 3817591-3821305 Arabidopsis thaliana
AT1G11350 0.5kb upstream 0.5kb upstream 500 false Chr1: 3820806-3821305 Arabidopsis thaliana
AT1G11350 0.5kb downstream 0.5kb downstream 3715 true Chr1: 3817091-3820805 Arabidopsis thaliana
AT1G11350 0.5kb downstream 0.5kb downstream 500 false Chr1: 3817091-3817590 Arabidopsis thaliana
AT1G11350 1.0kb upstream 1.0kb upstream 4215 true Chr1: 3817591-3821805 Arabidopsis thaliana
AT1G11350 1.0kb upstream 1.0kb upstream 1000 false Chr1: 3820806-3821805 Arabidopsis thaliana
AT1G11350 1.0kb downstream 1.0kb downstream 4215 true Chr1: 3816591-3820805 Arabidopsis thaliana
AT1G11350 1.0kb downstream 1.0kb downstream 1000 false Chr1: 3816591-3817590 Arabidopsis thaliana
AT1G11350 2.0kb upstream 2.0kb upstream 5215 true Chr1: 3817591-3822805 Arabidopsis thaliana
AT1G11350 2.0kb upstream 2.0kb upstream 2000 false Chr1: 3820806-3822805 Arabidopsis thaliana
AT1G11350 2.0kb downstream 2.0kb downstream 5215 true Chr1: 3815591-3820805 Arabidopsis thaliana
AT1G11350 2.0kb downstream 2.0kb downstream 2000 false Chr1: 3815591-3817590 Arabidopsis thaliana
AT1G11350 5.0kb upstream 5.0kb upstream 8215 true Chr1: 3817591-3825805 Arabidopsis thaliana
AT1G11350 5.0kb upstream 5.0kb upstream 5000 false Chr1: 3820806-3825805 Arabidopsis thaliana
AT1G11350 5.0kb downstream 5.0kb downstream 8215 true Chr1: 3812591-3820805 Arabidopsis thaliana
AT1G11350 5.0kb downstream 5.0kb downstream 5000 false Chr1: 3812591-3817590 Arabidopsis thaliana
AT1G11350 10.0kb upstream 10.0kb upstream 13215 true Chr1: 3817591-3830805 Arabidopsis thaliana
AT1G11350 10.0kb upstream 10.0kb upstream 10000 false Chr1: 3820806-3830805 Arabidopsis thaliana
AT1G11350 10.0kb downstream 10.0kb downstream 13215 true Chr1: 3807591-3820805 Arabidopsis thaliana
AT1G11350 10.0kb downstream 10.0kb downstream 10000 false Chr1: 3807591-3817590 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368653 5261 Brassicaceae View MSA
123841209 5264 Brassicales-Malvales View MSA
124349890 5266 SBM View MSA
124251825 5268 Malvidae View MSA
124074937 5270 Rosid View MSA
123753765 5271 Pentapetalae View MSA
122797900 5272 Eudicot View MSA
122051692 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121351748 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 24.337       High
cufflinks 3.043        
cufflinks 18.048        
cufflinks 2.104        
cufflinks 18.803        
cufflinks 1.792       Low

0 Strain