Gene : AT1G11100 A. thaliana TAIR10
Defline:  (1 of 2) PTHR10799:SF705 - SNF2 , HELICASE AND ZINC-FINGER DOMAIN-CONTAINING PROTEIN-RELATED Genomic Order:  1080
Name:  ? AT1G11100 Secondary Identifier:  ? PAC:19650496
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G11100 0.5kb upstream 0.5kb upstream 6131 true Chr1: 3703672-3709802 Arabidopsis thaliana
AT1G11100 0.5kb upstream 0.5kb upstream 500 false Chr1: 3709303-3709802 Arabidopsis thaliana
AT1G11100 0.5kb downstream 0.5kb downstream 6131 true Chr1: 3703172-3709302 Arabidopsis thaliana
AT1G11100 0.5kb downstream 0.5kb downstream 500 false Chr1: 3703172-3703671 Arabidopsis thaliana
AT1G11100 1.0kb upstream 1.0kb upstream 6631 true Chr1: 3703672-3710302 Arabidopsis thaliana
AT1G11100 1.0kb upstream 1.0kb upstream 1000 false Chr1: 3709303-3710302 Arabidopsis thaliana
AT1G11100 1.0kb downstream 1.0kb downstream 6631 true Chr1: 3702672-3709302 Arabidopsis thaliana
AT1G11100 1.0kb downstream 1.0kb downstream 1000 false Chr1: 3702672-3703671 Arabidopsis thaliana
AT1G11100 2.0kb upstream 2.0kb upstream 7631 true Chr1: 3703672-3711302 Arabidopsis thaliana
AT1G11100 2.0kb upstream 2.0kb upstream 2000 false Chr1: 3709303-3711302 Arabidopsis thaliana
AT1G11100 2.0kb downstream 2.0kb downstream 7631 true Chr1: 3701672-3709302 Arabidopsis thaliana
AT1G11100 2.0kb downstream 2.0kb downstream 2000 false Chr1: 3701672-3703671 Arabidopsis thaliana
AT1G11100 5.0kb upstream 5.0kb upstream 10631 true Chr1: 3703672-3714302 Arabidopsis thaliana
AT1G11100 5.0kb upstream 5.0kb upstream 5000 false Chr1: 3709303-3714302 Arabidopsis thaliana
AT1G11100 5.0kb downstream 5.0kb downstream 10631 true Chr1: 3698672-3709302 Arabidopsis thaliana
AT1G11100 5.0kb downstream 5.0kb downstream 5000 false Chr1: 3698672-3703671 Arabidopsis thaliana
AT1G11100 10.0kb upstream 10.0kb upstream 15631 true Chr1: 3703672-3719302 Arabidopsis thaliana
AT1G11100 10.0kb upstream 10.0kb upstream 10000 false Chr1: 3709303-3719302 Arabidopsis thaliana
AT1G11100 10.0kb downstream 10.0kb downstream 15631 true Chr1: 3693672-3709302 Arabidopsis thaliana
AT1G11100 10.0kb downstream 10.0kb downstream 10000 false Chr1: 3693672-3703671 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122343234 5261 Brassicaceae View MSA
123783492 5264 Brassicales-Malvales View MSA
124281723 5266 SBM View MSA
124136433 5268 Malvidae View MSA
124061950 5270 Rosid View MSA
123743862 5271 Pentapetalae View MSA
122797067 5272 Eudicot View MSA
122048342 5273 Angiosperm View MSA
121347136 5274 Embryophyte View MSA
123428510 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.118     Low  
cufflinks 0.602        
cufflinks 0.046     Low Low
cufflinks 0.954       High
cufflinks 0.064     Low  
cufflinks 0.609        

0 Strain