Gene : AT1G10490 A. thaliana TAIR10
Defline:  (1 of 2) 2.3.1.193 - tRNA(Met) cytidine acetyltransferase Genomic Order:  1012
Name:  ? AT1G10490 Secondary Identifier:  ? PAC:19651199
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G10490 0.5kb upstream 0.5kb upstream 7893 true Chr1: 3452728-3460620 Arabidopsis thaliana
AT1G10490 0.5kb upstream 0.5kb upstream 500 false Chr1: 3452728-3453227 Arabidopsis thaliana
AT1G10490 0.5kb downstream 0.5kb downstream 7893 true Chr1: 3453228-3461120 Arabidopsis thaliana
AT1G10490 0.5kb downstream 0.5kb downstream 500 false Chr1: 3460621-3461120 Arabidopsis thaliana
AT1G10490 1.0kb upstream 1.0kb upstream 8393 true Chr1: 3452228-3460620 Arabidopsis thaliana
AT1G10490 1.0kb upstream 1.0kb upstream 1000 false Chr1: 3452228-3453227 Arabidopsis thaliana
AT1G10490 1.0kb downstream 1.0kb downstream 8393 true Chr1: 3453228-3461620 Arabidopsis thaliana
AT1G10490 1.0kb downstream 1.0kb downstream 1000 false Chr1: 3460621-3461620 Arabidopsis thaliana
AT1G10490 2.0kb upstream 2.0kb upstream 9393 true Chr1: 3451228-3460620 Arabidopsis thaliana
AT1G10490 2.0kb upstream 2.0kb upstream 2000 false Chr1: 3451228-3453227 Arabidopsis thaliana
AT1G10490 2.0kb downstream 2.0kb downstream 9393 true Chr1: 3453228-3462620 Arabidopsis thaliana
AT1G10490 2.0kb downstream 2.0kb downstream 2000 false Chr1: 3460621-3462620 Arabidopsis thaliana
AT1G10490 5.0kb upstream 5.0kb upstream 12393 true Chr1: 3448228-3460620 Arabidopsis thaliana
AT1G10490 5.0kb upstream 5.0kb upstream 5000 false Chr1: 3448228-3453227 Arabidopsis thaliana
AT1G10490 5.0kb downstream 5.0kb downstream 12393 true Chr1: 3453228-3465620 Arabidopsis thaliana
AT1G10490 5.0kb downstream 5.0kb downstream 5000 false Chr1: 3460621-3465620 Arabidopsis thaliana
AT1G10490 10.0kb upstream 10.0kb upstream 17393 true Chr1: 3443228-3460620 Arabidopsis thaliana
AT1G10490 10.0kb upstream 10.0kb upstream 10000 false Chr1: 3443228-3453227 Arabidopsis thaliana
AT1G10490 10.0kb downstream 10.0kb downstream 17393 true Chr1: 3453228-3470620 Arabidopsis thaliana
AT1G10490 10.0kb downstream 10.0kb downstream 10000 false Chr1: 3460621-3470620 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367454 5261 Brassicaceae View MSA
123841215 5264 Brassicales-Malvales View MSA
124344986 5266 SBM View MSA
124252255 5268 Malvidae View MSA
124066965 5270 Rosid View MSA
123740567 5271 Pentapetalae View MSA
122793824 5272 Eudicot View MSA
122042891 5273 Angiosperm View MSA
121344057 5274 Embryophyte View MSA
123424540 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.617        
cufflinks 7.625        
cufflinks 3.992        
cufflinks 7.948        
cufflinks 3.205       Low
cufflinks 8.473        

0 Strain