Gene : AT1G08845 A. thaliana TAIR10
Defline:  (1 of 1) PTHR12899:SF5 - RIBOSOMAL L18P/L5E FAMILY PROTEIN Genomic Order:  834
Name:  ? AT1G08845 Secondary Identifier:  ? PAC:19649272
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G08845 0.5kb upstream 0.5kb upstream 2706 true Chr1: 2838289-2840994 Arabidopsis thaliana
AT1G08845 0.5kb upstream 0.5kb upstream 500 false Chr1: 2838289-2838788 Arabidopsis thaliana
AT1G08845 0.5kb downstream 0.5kb downstream 2706 true Chr1: 2838789-2841494 Arabidopsis thaliana
AT1G08845 0.5kb downstream 0.5kb downstream 500 false Chr1: 2840995-2841494 Arabidopsis thaliana
AT1G08845 1.0kb upstream 1.0kb upstream 3206 true Chr1: 2837789-2840994 Arabidopsis thaliana
AT1G08845 1.0kb upstream 1.0kb upstream 1000 false Chr1: 2837789-2838788 Arabidopsis thaliana
AT1G08845 1.0kb downstream 1.0kb downstream 3206 true Chr1: 2838789-2841994 Arabidopsis thaliana
AT1G08845 1.0kb downstream 1.0kb downstream 1000 false Chr1: 2840995-2841994 Arabidopsis thaliana
AT1G08845 2.0kb upstream 2.0kb upstream 4206 true Chr1: 2836789-2840994 Arabidopsis thaliana
AT1G08845 2.0kb upstream 2.0kb upstream 2000 false Chr1: 2836789-2838788 Arabidopsis thaliana
AT1G08845 2.0kb downstream 2.0kb downstream 4206 true Chr1: 2838789-2842994 Arabidopsis thaliana
AT1G08845 2.0kb downstream 2.0kb downstream 2000 false Chr1: 2840995-2842994 Arabidopsis thaliana
AT1G08845 5.0kb upstream 5.0kb upstream 7206 true Chr1: 2833789-2840994 Arabidopsis thaliana
AT1G08845 5.0kb upstream 5.0kb upstream 5000 false Chr1: 2833789-2838788 Arabidopsis thaliana
AT1G08845 5.0kb downstream 5.0kb downstream 7206 true Chr1: 2838789-2845994 Arabidopsis thaliana
AT1G08845 5.0kb downstream 5.0kb downstream 5000 false Chr1: 2840995-2845994 Arabidopsis thaliana
AT1G08845 10.0kb upstream 10.0kb upstream 12206 true Chr1: 2828789-2840994 Arabidopsis thaliana
AT1G08845 10.0kb upstream 10.0kb upstream 10000 false Chr1: 2828789-2838788 Arabidopsis thaliana
AT1G08845 10.0kb downstream 10.0kb downstream 12206 true Chr1: 2838789-2850994 Arabidopsis thaliana
AT1G08845 10.0kb downstream 10.0kb downstream 10000 false Chr1: 2840995-2850994 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122376476 5261 Brassicaceae View MSA
123831943 5264 Brassicales-Malvales View MSA
124337930 5266 SBM View MSA
124250244 5268 Malvidae View MSA
124063068 5270 Rosid View MSA
123738575 5271 Pentapetalae View MSA
122789251 5272 Eudicot View MSA
122043633 5273 Angiosperm View MSA
121351328 5274 Embryophyte View MSA
123382121 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.239        
cufflinks 1.322        
cufflinks 1.042       Low
cufflinks 1.67       High
cufflinks 1.07        
cufflinks 1.401        

0 Strain