Gene : AT1G16800 A. thaliana TAIR10
Defline:  (1 of 1) PTHR10887//PTHR10887:SF140 - DNA2/NAM7 HELICASE FAMILY // PROTEIN ERI-7 Genomic Order:  1686
Name:  ? AT1G16800 Secondary Identifier:  ? PAC:19657929
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G16800 0.5kb upstream 0.5kb upstream 10241 true Chr1: 5745523-5755763 Arabidopsis thaliana
AT1G16800 0.5kb upstream 0.5kb upstream 500 false Chr1: 5755264-5755763 Arabidopsis thaliana
AT1G16800 0.5kb downstream 0.5kb downstream 10241 true Chr1: 5745023-5755263 Arabidopsis thaliana
AT1G16800 0.5kb downstream 0.5kb downstream 500 false Chr1: 5745023-5745522 Arabidopsis thaliana
AT1G16800 1.0kb upstream 1.0kb upstream 10741 true Chr1: 5745523-5756263 Arabidopsis thaliana
AT1G16800 1.0kb upstream 1.0kb upstream 1000 false Chr1: 5755264-5756263 Arabidopsis thaliana
AT1G16800 1.0kb downstream 1.0kb downstream 10741 true Chr1: 5744523-5755263 Arabidopsis thaliana
AT1G16800 1.0kb downstream 1.0kb downstream 1000 false Chr1: 5744523-5745522 Arabidopsis thaliana
AT1G16800 2.0kb upstream 2.0kb upstream 11741 true Chr1: 5745523-5757263 Arabidopsis thaliana
AT1G16800 2.0kb upstream 2.0kb upstream 2000 false Chr1: 5755264-5757263 Arabidopsis thaliana
AT1G16800 2.0kb downstream 2.0kb downstream 11741 true Chr1: 5743523-5755263 Arabidopsis thaliana
AT1G16800 2.0kb downstream 2.0kb downstream 2000 false Chr1: 5743523-5745522 Arabidopsis thaliana
AT1G16800 5.0kb upstream 5.0kb upstream 14741 true Chr1: 5745523-5760263 Arabidopsis thaliana
AT1G16800 5.0kb upstream 5.0kb upstream 5000 false Chr1: 5755264-5760263 Arabidopsis thaliana
AT1G16800 5.0kb downstream 5.0kb downstream 14741 true Chr1: 5740523-5755263 Arabidopsis thaliana
AT1G16800 5.0kb downstream 5.0kb downstream 5000 false Chr1: 5740523-5745522 Arabidopsis thaliana
AT1G16800 10.0kb upstream 10.0kb upstream 19741 true Chr1: 5745523-5765263 Arabidopsis thaliana
AT1G16800 10.0kb upstream 10.0kb upstream 10000 false Chr1: 5755264-5765263 Arabidopsis thaliana
AT1G16800 10.0kb downstream 10.0kb downstream 19741 true Chr1: 5735523-5755263 Arabidopsis thaliana
AT1G16800 10.0kb downstream 10.0kb downstream 10000 false Chr1: 5735523-5745522 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368106 5261 Brassicaceae View MSA
123828187 5264 Brassicales-Malvales View MSA
124342219 5266 SBM View MSA
124238250 5268 Malvidae View MSA
124050375 5270 Rosid View MSA
123751960 5271 Pentapetalae View MSA
122793579 5272 Eudicot View MSA
122046375 5273 Angiosperm View MSA
123429092 5275 Viridiplantae View MSA
121350941 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.145        
cufflinks 3.04       High
cufflinks 1.032        
cufflinks 2.72        
cufflinks 0.861       Low
cufflinks 2.554        

0 Strain