Gene : CNGC7 A. thaliana TAIR10
Primary Identifier:  ? AT1G15990 Defline:  (1 of 2) PTHR10217:SF489 - CYCLIC NUCLEOTIDE-GATED ION CHANNEL 7-RELATED
Genomic Order:  1609 Name:  ? AT1G15990
Secondary Identifier:  ? PAC:19655008
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0 Pathways

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G15990 0.5kb upstream 0.5kb upstream 2969 true Chr1: 5491304-5494272 Arabidopsis thaliana
AT1G15990 0.5kb upstream 0.5kb upstream 500 false Chr1: 5493773-5494272 Arabidopsis thaliana
AT1G15990 0.5kb downstream 0.5kb downstream 2969 true Chr1: 5490804-5493772 Arabidopsis thaliana
AT1G15990 0.5kb downstream 0.5kb downstream 500 false Chr1: 5490804-5491303 Arabidopsis thaliana
AT1G15990 1.0kb upstream 1.0kb upstream 3469 true Chr1: 5491304-5494772 Arabidopsis thaliana
AT1G15990 1.0kb upstream 1.0kb upstream 1000 false Chr1: 5493773-5494772 Arabidopsis thaliana
AT1G15990 1.0kb downstream 1.0kb downstream 3469 true Chr1: 5490304-5493772 Arabidopsis thaliana
AT1G15990 1.0kb downstream 1.0kb downstream 1000 false Chr1: 5490304-5491303 Arabidopsis thaliana
AT1G15990 2.0kb upstream 2.0kb upstream 4469 true Chr1: 5491304-5495772 Arabidopsis thaliana
AT1G15990 2.0kb upstream 2.0kb upstream 2000 false Chr1: 5493773-5495772 Arabidopsis thaliana
AT1G15990 2.0kb downstream 2.0kb downstream 4469 true Chr1: 5489304-5493772 Arabidopsis thaliana
AT1G15990 2.0kb downstream 2.0kb downstream 2000 false Chr1: 5489304-5491303 Arabidopsis thaliana
AT1G15990 5.0kb upstream 5.0kb upstream 7469 true Chr1: 5491304-5498772 Arabidopsis thaliana
AT1G15990 5.0kb upstream 5.0kb upstream 5000 false Chr1: 5493773-5498772 Arabidopsis thaliana
AT1G15990 5.0kb downstream 5.0kb downstream 7469 true Chr1: 5486304-5493772 Arabidopsis thaliana
AT1G15990 5.0kb downstream 5.0kb downstream 5000 false Chr1: 5486304-5491303 Arabidopsis thaliana
AT1G15990 10.0kb upstream 10.0kb upstream 12469 true Chr1: 5491304-5503772 Arabidopsis thaliana
AT1G15990 10.0kb upstream 10.0kb upstream 10000 false Chr1: 5493773-5503772 Arabidopsis thaliana
AT1G15990 10.0kb downstream 10.0kb downstream 12469 true Chr1: 5481304-5493772 Arabidopsis thaliana
AT1G15990 10.0kb downstream 10.0kb downstream 10000 false Chr1: 5481304-5491303 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122360553 5261 Brassicaceae View MSA
123837913 5264 Brassicales-Malvales View MSA
124322374 5266 SBM View MSA
124243676 5268 Malvidae View MSA
124066600 5270 Rosid View MSA
123748998 5271 Pentapetalae View MSA
122786679 5272 Eudicot View MSA
122043565 5273 Angiosperm View MSA
121351754 5274 Embryophyte View MSA
123428762 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.006     Low  

0 Strain