Gene : TRFL5 A. thaliana TAIR10
Primary Identifier:  ? AT1G15720 Defline:  (1 of 22) PTHR21717 - TELOMERIC REPEAT BINDING PROTEIN
Genomic Order:  1578 Name:  ? AT1G15720
Secondary Identifier:  ? PAC:19654089
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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G15720 0.5kb upstream 0.5kb upstream 1962 true Chr1: 5405525-5407486 Arabidopsis thaliana
AT1G15720 0.5kb upstream 0.5kb upstream 500 false Chr1: 5405525-5406024 Arabidopsis thaliana
AT1G15720 0.5kb downstream 0.5kb downstream 1962 true Chr1: 5406025-5407986 Arabidopsis thaliana
AT1G15720 0.5kb downstream 0.5kb downstream 500 false Chr1: 5407487-5407986 Arabidopsis thaliana
AT1G15720 1.0kb upstream 1.0kb upstream 2462 true Chr1: 5405025-5407486 Arabidopsis thaliana
AT1G15720 1.0kb upstream 1.0kb upstream 1000 false Chr1: 5405025-5406024 Arabidopsis thaliana
AT1G15720 1.0kb downstream 1.0kb downstream 2462 true Chr1: 5406025-5408486 Arabidopsis thaliana
AT1G15720 1.0kb downstream 1.0kb downstream 1000 false Chr1: 5407487-5408486 Arabidopsis thaliana
AT1G15720 2.0kb upstream 2.0kb upstream 3462 true Chr1: 5404025-5407486 Arabidopsis thaliana
AT1G15720 2.0kb upstream 2.0kb upstream 2000 false Chr1: 5404025-5406024 Arabidopsis thaliana
AT1G15720 2.0kb downstream 2.0kb downstream 3462 true Chr1: 5406025-5409486 Arabidopsis thaliana
AT1G15720 2.0kb downstream 2.0kb downstream 2000 false Chr1: 5407487-5409486 Arabidopsis thaliana
AT1G15720 5.0kb upstream 5.0kb upstream 6462 true Chr1: 5401025-5407486 Arabidopsis thaliana
AT1G15720 5.0kb upstream 5.0kb upstream 5000 false Chr1: 5401025-5406024 Arabidopsis thaliana
AT1G15720 5.0kb downstream 5.0kb downstream 6462 true Chr1: 5406025-5412486 Arabidopsis thaliana
AT1G15720 5.0kb downstream 5.0kb downstream 5000 false Chr1: 5407487-5412486 Arabidopsis thaliana
AT1G15720 10.0kb upstream 10.0kb upstream 11462 true Chr1: 5396025-5407486 Arabidopsis thaliana
AT1G15720 10.0kb upstream 10.0kb upstream 10000 false Chr1: 5396025-5406024 Arabidopsis thaliana
AT1G15720 10.0kb downstream 10.0kb downstream 11462 true Chr1: 5406025-5417486 Arabidopsis thaliana
AT1G15720 10.0kb downstream 10.0kb downstream 10000 false Chr1: 5407487-5417486 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122376839 5261 Brassicaceae View MSA
123841207 5264 Brassicales-Malvales View MSA
124350491 5266 SBM View MSA
124247952 5268 Malvidae View MSA
124067542 5270 Rosid View MSA
123751765 5271 Pentapetalae View MSA
122796417 5272 Eudicot View MSA
122048444 5273 Angiosperm View MSA
121347141 5274 Embryophyte View MSA
123425851 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.584        
cufflinks 4.106        
cufflinks 1.284       Low
cufflinks 5.069       High
cufflinks 1.419        
cufflinks 4.471        

0 Strain