Gene : ECB2 A. thaliana TAIR10
Primary Identifier:  ? AT1G15510 Defline:  (1 of 61) PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase)
Genomic Order:  1559 Name:  ? AT1G15510
Secondary Identifier:  ? PAC:19651458
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0 Pathways

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Expression

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3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G15510 0.5kb upstream 0.5kb upstream 3101 true Chr1: 5328611-5331711 Arabidopsis thaliana
AT1G15510 0.5kb upstream 0.5kb upstream 500 false Chr1: 5328611-5329110 Arabidopsis thaliana
AT1G15510 0.5kb downstream 0.5kb downstream 3101 true Chr1: 5329111-5332211 Arabidopsis thaliana
AT1G15510 0.5kb downstream 0.5kb downstream 500 false Chr1: 5331712-5332211 Arabidopsis thaliana
AT1G15510 1.0kb upstream 1.0kb upstream 3601 true Chr1: 5328111-5331711 Arabidopsis thaliana
AT1G15510 1.0kb upstream 1.0kb upstream 1000 false Chr1: 5328111-5329110 Arabidopsis thaliana
AT1G15510 1.0kb downstream 1.0kb downstream 3601 true Chr1: 5329111-5332711 Arabidopsis thaliana
AT1G15510 1.0kb downstream 1.0kb downstream 1000 false Chr1: 5331712-5332711 Arabidopsis thaliana
AT1G15510 2.0kb upstream 2.0kb upstream 4601 true Chr1: 5327111-5331711 Arabidopsis thaliana
AT1G15510 2.0kb upstream 2.0kb upstream 2000 false Chr1: 5327111-5329110 Arabidopsis thaliana
AT1G15510 2.0kb downstream 2.0kb downstream 4601 true Chr1: 5329111-5333711 Arabidopsis thaliana
AT1G15510 2.0kb downstream 2.0kb downstream 2000 false Chr1: 5331712-5333711 Arabidopsis thaliana
AT1G15510 5.0kb upstream 5.0kb upstream 7601 true Chr1: 5324111-5331711 Arabidopsis thaliana
AT1G15510 5.0kb upstream 5.0kb upstream 5000 false Chr1: 5324111-5329110 Arabidopsis thaliana
AT1G15510 5.0kb downstream 5.0kb downstream 7601 true Chr1: 5329111-5336711 Arabidopsis thaliana
AT1G15510 5.0kb downstream 5.0kb downstream 5000 false Chr1: 5331712-5336711 Arabidopsis thaliana
AT1G15510 10.0kb upstream 10.0kb upstream 12601 true Chr1: 5319111-5331711 Arabidopsis thaliana
AT1G15510 10.0kb upstream 10.0kb upstream 10000 false Chr1: 5319111-5329110 Arabidopsis thaliana
AT1G15510 10.0kb downstream 10.0kb downstream 12601 true Chr1: 5329111-5341711 Arabidopsis thaliana
AT1G15510 10.0kb downstream 10.0kb downstream 10000 false Chr1: 5331712-5341711 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364844 5261 Brassicaceae View MSA
123833186 5264 Brassicales-Malvales View MSA
124338183 5266 SBM View MSA
124245140 5268 Malvidae View MSA
124060776 5270 Rosid View MSA
123741024 5271 Pentapetalae View MSA
122797667 5272 Eudicot View MSA
122051669 5273 Angiosperm View MSA
123429046 5275 Viridiplantae View MSA
121351733 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.08       High
cufflinks 1.055       Low
cufflinks 4.951        
cufflinks 1.325        
cufflinks 3.498        
cufflinks 1.219        

0 Strain