Gene : CPN10 A. thaliana TAIR10
Primary Identifier:  ? AT1G14980 Defline:  (1 of 1) PTHR10772//PTHR10772:SF8 - 10 KDA HEAT SHOCK PROTEIN // 10 KDA CHAPERONIN
Genomic Order:  1503 Name:  ? AT1G14980
Secondary Identifier:  ? PAC:19652922
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G14980 0.5kb upstream 0.5kb upstream 1618 true Chr1: 5165628-5167245 Arabidopsis thaliana
AT1G14980 0.5kb upstream 0.5kb upstream 500 false Chr1: 5166746-5167245 Arabidopsis thaliana
AT1G14980 0.5kb downstream 0.5kb downstream 1618 true Chr1: 5165128-5166745 Arabidopsis thaliana
AT1G14980 0.5kb downstream 0.5kb downstream 500 false Chr1: 5165128-5165627 Arabidopsis thaliana
AT1G14980 1.0kb upstream 1.0kb upstream 2118 true Chr1: 5165628-5167745 Arabidopsis thaliana
AT1G14980 1.0kb upstream 1.0kb upstream 1000 false Chr1: 5166746-5167745 Arabidopsis thaliana
AT1G14980 1.0kb downstream 1.0kb downstream 2118 true Chr1: 5164628-5166745 Arabidopsis thaliana
AT1G14980 1.0kb downstream 1.0kb downstream 1000 false Chr1: 5164628-5165627 Arabidopsis thaliana
AT1G14980 2.0kb upstream 2.0kb upstream 3118 true Chr1: 5165628-5168745 Arabidopsis thaliana
AT1G14980 2.0kb upstream 2.0kb upstream 2000 false Chr1: 5166746-5168745 Arabidopsis thaliana
AT1G14980 2.0kb downstream 2.0kb downstream 3118 true Chr1: 5163628-5166745 Arabidopsis thaliana
AT1G14980 2.0kb downstream 2.0kb downstream 2000 false Chr1: 5163628-5165627 Arabidopsis thaliana
AT1G14980 5.0kb upstream 5.0kb upstream 6118 true Chr1: 5165628-5171745 Arabidopsis thaliana
AT1G14980 5.0kb upstream 5.0kb upstream 5000 false Chr1: 5166746-5171745 Arabidopsis thaliana
AT1G14980 5.0kb downstream 5.0kb downstream 6118 true Chr1: 5160628-5166745 Arabidopsis thaliana
AT1G14980 5.0kb downstream 5.0kb downstream 5000 false Chr1: 5160628-5165627 Arabidopsis thaliana
AT1G14980 10.0kb upstream 10.0kb upstream 11118 true Chr1: 5165628-5176745 Arabidopsis thaliana
AT1G14980 10.0kb upstream 10.0kb upstream 10000 false Chr1: 5166746-5176745 Arabidopsis thaliana
AT1G14980 10.0kb downstream 10.0kb downstream 11118 true Chr1: 5155628-5166745 Arabidopsis thaliana
AT1G14980 10.0kb downstream 10.0kb downstream 10000 false Chr1: 5155628-5165627 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364024 5261 Brassicaceae View MSA
123839038 5264 Brassicales-Malvales View MSA
124349382 5266 SBM View MSA
124244371 5268 Malvidae View MSA
124072260 5270 Rosid View MSA
123746133 5271 Pentapetalae View MSA
122796969 5272 Eudicot View MSA
122049183 5273 Angiosperm View MSA
121347875 5274 Embryophyte View MSA
123425048 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 67.262     High  
cufflinks 69.79     High  
cufflinks 42.203     High Low
cufflinks 86.098     High  
cufflinks 39.603     High Low
cufflinks 95.259     High High

0 Strain