Gene : TWN2 A. thaliana TAIR10
Primary Identifier:  ? AT1G14610 Defline:  (1 of 1) PTHR11946//PTHR11946:SF5 - ISOLEUCYL, LEUCYL, TYROSYL, VALYL AND METHIONYL-TRNA SYNTHETASES // VALYL-TRNA SYNTHETASE, ISOFORM A
Genomic Order:  1460 Name:  ? AT1G14610
Secondary Identifier:  ? PAC:19649831
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana TRNA-CHARGING-PWY Arabidopsis thaliana pathologic  

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G14610 0.5kb upstream 0.5kb upstream 6790 true Chr1: 5008244-5015033 Arabidopsis thaliana
AT1G14610 0.5kb upstream 0.5kb upstream 500 false Chr1: 5014534-5015033 Arabidopsis thaliana
AT1G14610 0.5kb downstream 0.5kb downstream 6790 true Chr1: 5007744-5014533 Arabidopsis thaliana
AT1G14610 0.5kb downstream 0.5kb downstream 500 false Chr1: 5007744-5008243 Arabidopsis thaliana
AT1G14610 1.0kb upstream 1.0kb upstream 7290 true Chr1: 5008244-5015533 Arabidopsis thaliana
AT1G14610 1.0kb upstream 1.0kb upstream 1000 false Chr1: 5014534-5015533 Arabidopsis thaliana
AT1G14610 1.0kb downstream 1.0kb downstream 7290 true Chr1: 5007244-5014533 Arabidopsis thaliana
AT1G14610 1.0kb downstream 1.0kb downstream 1000 false Chr1: 5007244-5008243 Arabidopsis thaliana
AT1G14610 2.0kb upstream 2.0kb upstream 8290 true Chr1: 5008244-5016533 Arabidopsis thaliana
AT1G14610 2.0kb upstream 2.0kb upstream 2000 false Chr1: 5014534-5016533 Arabidopsis thaliana
AT1G14610 2.0kb downstream 2.0kb downstream 8290 true Chr1: 5006244-5014533 Arabidopsis thaliana
AT1G14610 2.0kb downstream 2.0kb downstream 2000 false Chr1: 5006244-5008243 Arabidopsis thaliana
AT1G14610 5.0kb upstream 5.0kb upstream 11290 true Chr1: 5008244-5019533 Arabidopsis thaliana
AT1G14610 5.0kb upstream 5.0kb upstream 5000 false Chr1: 5014534-5019533 Arabidopsis thaliana
AT1G14610 5.0kb downstream 5.0kb downstream 11290 true Chr1: 5003244-5014533 Arabidopsis thaliana
AT1G14610 5.0kb downstream 5.0kb downstream 5000 false Chr1: 5003244-5008243 Arabidopsis thaliana
AT1G14610 10.0kb upstream 10.0kb upstream 16290 true Chr1: 5008244-5024533 Arabidopsis thaliana
AT1G14610 10.0kb upstream 10.0kb upstream 10000 false Chr1: 5014534-5024533 Arabidopsis thaliana
AT1G14610 10.0kb downstream 10.0kb downstream 16290 true Chr1: 4998244-5014533 Arabidopsis thaliana
AT1G14610 10.0kb downstream 10.0kb downstream 10000 false Chr1: 4998244-5008243 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365312 5261 Brassicaceae View MSA
123827608 5264 Brassicales-Malvales View MSA
124350639 5266 SBM View MSA
124237752 5268 Malvidae View MSA
124066992 5270 Rosid View MSA
123752070 5271 Pentapetalae View MSA
122788218 5272 Eudicot View MSA
122045228 5273 Angiosperm View MSA
121348805 5274 Embryophyte View MSA
123424302 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 20.683        
cufflinks 26.861        
cufflinks 19.799        
cufflinks 30.189       High
cufflinks 18.65       Low
cufflinks 30.056     High High

0 Strain