Gene : AT1G13120 A. thaliana TAIR10
Defline:  (1 of 1) K18723 - nucleoporin GLE1 (GLE1) Genomic Order:  1301
Name:  ? AT1G13120 Secondary Identifier:  ? PAC:19653391
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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G13120 0.5kb upstream 0.5kb upstream 4533 true Chr1: 4469181-4473713 Arabidopsis thaliana
AT1G13120 0.5kb upstream 0.5kb upstream 500 false Chr1: 4473214-4473713 Arabidopsis thaliana
AT1G13120 0.5kb downstream 0.5kb downstream 4533 true Chr1: 4468681-4473213 Arabidopsis thaliana
AT1G13120 0.5kb downstream 0.5kb downstream 500 false Chr1: 4468681-4469180 Arabidopsis thaliana
AT1G13120 1.0kb upstream 1.0kb upstream 5033 true Chr1: 4469181-4474213 Arabidopsis thaliana
AT1G13120 1.0kb upstream 1.0kb upstream 1000 false Chr1: 4473214-4474213 Arabidopsis thaliana
AT1G13120 1.0kb downstream 1.0kb downstream 5033 true Chr1: 4468181-4473213 Arabidopsis thaliana
AT1G13120 1.0kb downstream 1.0kb downstream 1000 false Chr1: 4468181-4469180 Arabidopsis thaliana
AT1G13120 2.0kb upstream 2.0kb upstream 6033 true Chr1: 4469181-4475213 Arabidopsis thaliana
AT1G13120 2.0kb upstream 2.0kb upstream 2000 false Chr1: 4473214-4475213 Arabidopsis thaliana
AT1G13120 2.0kb downstream 2.0kb downstream 6033 true Chr1: 4467181-4473213 Arabidopsis thaliana
AT1G13120 2.0kb downstream 2.0kb downstream 2000 false Chr1: 4467181-4469180 Arabidopsis thaliana
AT1G13120 5.0kb upstream 5.0kb upstream 9033 true Chr1: 4469181-4478213 Arabidopsis thaliana
AT1G13120 5.0kb upstream 5.0kb upstream 5000 false Chr1: 4473214-4478213 Arabidopsis thaliana
AT1G13120 5.0kb downstream 5.0kb downstream 9033 true Chr1: 4464181-4473213 Arabidopsis thaliana
AT1G13120 5.0kb downstream 5.0kb downstream 5000 false Chr1: 4464181-4469180 Arabidopsis thaliana
AT1G13120 10.0kb upstream 10.0kb upstream 14033 true Chr1: 4469181-4483213 Arabidopsis thaliana
AT1G13120 10.0kb upstream 10.0kb upstream 10000 false Chr1: 4473214-4483213 Arabidopsis thaliana
AT1G13120 10.0kb downstream 10.0kb downstream 14033 true Chr1: 4459181-4473213 Arabidopsis thaliana
AT1G13120 10.0kb downstream 10.0kb downstream 10000 false Chr1: 4459181-4469180 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368881 5261 Brassicaceae View MSA
123829473 5264 Brassicales-Malvales View MSA
124344209 5266 SBM View MSA
124241264 5268 Malvidae View MSA
124065285 5270 Rosid View MSA
123740284 5271 Pentapetalae View MSA
122790886 5272 Eudicot View MSA
122045266 5273 Angiosperm View MSA
121346292 5274 Embryophyte View MSA
123425199 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.044        
cufflinks 10.699       High
cufflinks 5.998       Low
cufflinks 9.759        
cufflinks 5.808       Low
cufflinks 9.831        

0 Strain