Gene : AT1G13130 A. thaliana TAIR10
Defline:  (1 of 2) PF00150//PF00652 - Cellulase (glycosyl hydrolase family 5) (Cellulase) // Ricin-type beta-trefoil lectin domain (Ricin_B_lectin) Genomic Order:  1302
Name:  ? AT1G13130 Secondary Identifier:  ? PAC:19652290
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G13130 0.5kb upstream 0.5kb upstream 3722 true Chr1: 4474220-4477941 Arabidopsis thaliana
AT1G13130 0.5kb upstream 0.5kb upstream 500 false Chr1: 4474220-4474719 Arabidopsis thaliana
AT1G13130 0.5kb downstream 0.5kb downstream 3722 true Chr1: 4474720-4478441 Arabidopsis thaliana
AT1G13130 0.5kb downstream 0.5kb downstream 500 false Chr1: 4477942-4478441 Arabidopsis thaliana
AT1G13130 1.0kb upstream 1.0kb upstream 4222 true Chr1: 4473720-4477941 Arabidopsis thaliana
AT1G13130 1.0kb upstream 1.0kb upstream 1000 false Chr1: 4473720-4474719 Arabidopsis thaliana
AT1G13130 1.0kb downstream 1.0kb downstream 4222 true Chr1: 4474720-4478941 Arabidopsis thaliana
AT1G13130 1.0kb downstream 1.0kb downstream 1000 false Chr1: 4477942-4478941 Arabidopsis thaliana
AT1G13130 2.0kb upstream 2.0kb upstream 5222 true Chr1: 4472720-4477941 Arabidopsis thaliana
AT1G13130 2.0kb upstream 2.0kb upstream 2000 false Chr1: 4472720-4474719 Arabidopsis thaliana
AT1G13130 2.0kb downstream 2.0kb downstream 5222 true Chr1: 4474720-4479941 Arabidopsis thaliana
AT1G13130 2.0kb downstream 2.0kb downstream 2000 false Chr1: 4477942-4479941 Arabidopsis thaliana
AT1G13130 5.0kb upstream 5.0kb upstream 8222 true Chr1: 4469720-4477941 Arabidopsis thaliana
AT1G13130 5.0kb upstream 5.0kb upstream 5000 false Chr1: 4469720-4474719 Arabidopsis thaliana
AT1G13130 5.0kb downstream 5.0kb downstream 8222 true Chr1: 4474720-4482941 Arabidopsis thaliana
AT1G13130 5.0kb downstream 5.0kb downstream 5000 false Chr1: 4477942-4482941 Arabidopsis thaliana
AT1G13130 10.0kb upstream 10.0kb upstream 13222 true Chr1: 4464720-4477941 Arabidopsis thaliana
AT1G13130 10.0kb upstream 10.0kb upstream 10000 false Chr1: 4464720-4474719 Arabidopsis thaliana
AT1G13130 10.0kb downstream 10.0kb downstream 13222 true Chr1: 4474720-4487941 Arabidopsis thaliana
AT1G13130 10.0kb downstream 10.0kb downstream 10000 false Chr1: 4477942-4487941 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122027175 5273 Angiosperm View MSA
122365192 5261 Brassicaceae View MSA
123829222 5264 Brassicales-Malvales View MSA
124342554 5266 SBM View MSA
124250410 5268 Malvidae View MSA
124061714 5270 Rosid View MSA
123740079 5271 Pentapetalae View MSA
122789324 5272 Eudicot View MSA
121351116 5274 Embryophyte View MSA
123426514 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.266     Low  
cufflinks 1.958        
cufflinks 0.061     Low Low
cufflinks 1.624        
cufflinks 0.114     Low  
cufflinks 4.139       High

0 Strain