Gene : XIA A. thaliana TAIR10
Primary Identifier:  ? AT1G04600 Defline:  (1 of 2) PTHR13140//PTHR13140:SF391 - MYOSIN // MYOSIN-10-RELATED
Genomic Order:  376 Name:  ? AT1G04600
Secondary Identifier:  ? PAC:19651579
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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G04600 0.5kb upstream 0.5kb upstream 10754 true Chr1: 1261623-1272376 Arabidopsis thaliana
AT1G04600 0.5kb upstream 0.5kb upstream 500 false Chr1: 1261623-1262122 Arabidopsis thaliana
AT1G04600 0.5kb downstream 0.5kb downstream 10754 true Chr1: 1262123-1272876 Arabidopsis thaliana
AT1G04600 0.5kb downstream 0.5kb downstream 500 false Chr1: 1272377-1272876 Arabidopsis thaliana
AT1G04600 1.0kb upstream 1.0kb upstream 11254 true Chr1: 1261123-1272376 Arabidopsis thaliana
AT1G04600 1.0kb upstream 1.0kb upstream 1000 false Chr1: 1261123-1262122 Arabidopsis thaliana
AT1G04600 1.0kb downstream 1.0kb downstream 11254 true Chr1: 1262123-1273376 Arabidopsis thaliana
AT1G04600 1.0kb downstream 1.0kb downstream 1000 false Chr1: 1272377-1273376 Arabidopsis thaliana
AT1G04600 2.0kb upstream 2.0kb upstream 12254 true Chr1: 1260123-1272376 Arabidopsis thaliana
AT1G04600 2.0kb upstream 2.0kb upstream 2000 false Chr1: 1260123-1262122 Arabidopsis thaliana
AT1G04600 2.0kb downstream 2.0kb downstream 12254 true Chr1: 1262123-1274376 Arabidopsis thaliana
AT1G04600 2.0kb downstream 2.0kb downstream 2000 false Chr1: 1272377-1274376 Arabidopsis thaliana
AT1G04600 5.0kb upstream 5.0kb upstream 15254 true Chr1: 1257123-1272376 Arabidopsis thaliana
AT1G04600 5.0kb upstream 5.0kb upstream 5000 false Chr1: 1257123-1262122 Arabidopsis thaliana
AT1G04600 5.0kb downstream 5.0kb downstream 15254 true Chr1: 1262123-1277376 Arabidopsis thaliana
AT1G04600 5.0kb downstream 5.0kb downstream 5000 false Chr1: 1272377-1277376 Arabidopsis thaliana
AT1G04600 10.0kb upstream 10.0kb upstream 20254 true Chr1: 1252123-1272376 Arabidopsis thaliana
AT1G04600 10.0kb upstream 10.0kb upstream 10000 false Chr1: 1252123-1262122 Arabidopsis thaliana
AT1G04600 10.0kb downstream 10.0kb downstream 20254 true Chr1: 1262123-1282376 Arabidopsis thaliana
AT1G04600 10.0kb downstream 10.0kb downstream 10000 false Chr1: 1272377-1282376 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122380300 5261 Brassicaceae View MSA
123835951 5264 Brassicales-Malvales View MSA
124322110 5266 SBM View MSA
124250252 5268 Malvidae View MSA
124072259 5270 Rosid View MSA
123751042 5271 Pentapetalae View MSA
122796187 5272 Eudicot View MSA
122047064 5273 Angiosperm View MSA
121344051 5274 Embryophyte View MSA
123428306 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.217       High
cufflinks 0.267     Low  
cufflinks 0.189     Low  
cufflinks 0.212     Low  
cufflinks 0.333        
cufflinks 0.225     Low  

0 Strain