Gene : SEC1A A. thaliana TAIR10
Primary Identifier:  ? AT1G02010 Defline:  (1 of 3) K15292 - syntaxin-binding protein 1 (STXBP1, MUNC18-1)
Genomic Order:  105 Name:  ? AT1G02010
Secondary Identifier:  ? PAC:19649235
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0 Pathways

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G02010 0.5kb upstream 0.5kb upstream 5090 true Chr1: 347391-352480 Arabidopsis thaliana
AT1G02010 0.5kb upstream 0.5kb upstream 500 false Chr1: 347391-347890 Arabidopsis thaliana
AT1G02010 0.5kb downstream 0.5kb downstream 5090 true Chr1: 347891-352980 Arabidopsis thaliana
AT1G02010 0.5kb downstream 0.5kb downstream 500 false Chr1: 352481-352980 Arabidopsis thaliana
AT1G02010 1.0kb upstream 1.0kb upstream 5590 true Chr1: 346891-352480 Arabidopsis thaliana
AT1G02010 1.0kb upstream 1.0kb upstream 1000 false Chr1: 346891-347890 Arabidopsis thaliana
AT1G02010 1.0kb downstream 1.0kb downstream 5590 true Chr1: 347891-353480 Arabidopsis thaliana
AT1G02010 1.0kb downstream 1.0kb downstream 1000 false Chr1: 352481-353480 Arabidopsis thaliana
AT1G02010 2.0kb upstream 2.0kb upstream 6590 true Chr1: 345891-352480 Arabidopsis thaliana
AT1G02010 2.0kb upstream 2.0kb upstream 2000 false Chr1: 345891-347890 Arabidopsis thaliana
AT1G02010 2.0kb downstream 2.0kb downstream 6590 true Chr1: 347891-354480 Arabidopsis thaliana
AT1G02010 2.0kb downstream 2.0kb downstream 2000 false Chr1: 352481-354480 Arabidopsis thaliana
AT1G02010 5.0kb upstream 5.0kb upstream 9590 true Chr1: 342891-352480 Arabidopsis thaliana
AT1G02010 5.0kb upstream 5.0kb upstream 5000 false Chr1: 342891-347890 Arabidopsis thaliana
AT1G02010 5.0kb downstream 5.0kb downstream 9590 true Chr1: 347891-357480 Arabidopsis thaliana
AT1G02010 5.0kb downstream 5.0kb downstream 5000 false Chr1: 352481-357480 Arabidopsis thaliana
AT1G02010 10.0kb upstream 10.0kb upstream 14590 true Chr1: 337891-352480 Arabidopsis thaliana
AT1G02010 10.0kb upstream 10.0kb upstream 10000 false Chr1: 337891-347890 Arabidopsis thaliana
AT1G02010 10.0kb downstream 10.0kb downstream 14590 true Chr1: 347891-362480 Arabidopsis thaliana
AT1G02010 10.0kb downstream 10.0kb downstream 10000 false Chr1: 352481-362480 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373959 5261 Brassicaceae View MSA
123832059 5264 Brassicales-Malvales View MSA
124344775 5266 SBM View MSA
124244400 5268 Malvidae View MSA
124071068 5270 Rosid View MSA
123752933 5271 Pentapetalae View MSA
122792100 5272 Eudicot View MSA
122047096 5273 Angiosperm View MSA
121350435 5274 Embryophyte View MSA
123426000 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.079       Low
cufflinks 2.049       High
cufflinks 1.427        
cufflinks 1.863        
cufflinks 1.143        
cufflinks 1.524        

0 Strain