Gene : PIP1C A. thaliana TAIR10
Primary Identifier:  ? AT1G01620 Defline:  (1 of 1) PTHR19139:SF90 - AQUAPORIN PIP1-5-RELATED
Genomic Order:  67 Name:  ? AT1G01620
Secondary Identifier:  ? PAC:19651137
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Expression

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3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G01620 0.5kb upstream 0.5kb upstream 2138 true Chr1: 225665-227802 Arabidopsis thaliana
AT1G01620 0.5kb upstream 0.5kb upstream 500 false Chr1: 227303-227802 Arabidopsis thaliana
AT1G01620 0.5kb downstream 0.5kb downstream 2138 true Chr1: 225165-227302 Arabidopsis thaliana
AT1G01620 0.5kb downstream 0.5kb downstream 500 false Chr1: 225165-225664 Arabidopsis thaliana
AT1G01620 1.0kb upstream 1.0kb upstream 2638 true Chr1: 225665-228302 Arabidopsis thaliana
AT1G01620 1.0kb upstream 1.0kb upstream 1000 false Chr1: 227303-228302 Arabidopsis thaliana
AT1G01620 1.0kb downstream 1.0kb downstream 2638 true Chr1: 224665-227302 Arabidopsis thaliana
AT1G01620 1.0kb downstream 1.0kb downstream 1000 false Chr1: 224665-225664 Arabidopsis thaliana
AT1G01620 2.0kb upstream 2.0kb upstream 3638 true Chr1: 225665-229302 Arabidopsis thaliana
AT1G01620 2.0kb upstream 2.0kb upstream 2000 false Chr1: 227303-229302 Arabidopsis thaliana
AT1G01620 2.0kb downstream 2.0kb downstream 3638 true Chr1: 223665-227302 Arabidopsis thaliana
AT1G01620 2.0kb downstream 2.0kb downstream 2000 false Chr1: 223665-225664 Arabidopsis thaliana
AT1G01620 5.0kb upstream 5.0kb upstream 6638 true Chr1: 225665-232302 Arabidopsis thaliana
AT1G01620 5.0kb upstream 5.0kb upstream 5000 false Chr1: 227303-232302 Arabidopsis thaliana
AT1G01620 5.0kb downstream 5.0kb downstream 6638 true Chr1: 220665-227302 Arabidopsis thaliana
AT1G01620 5.0kb downstream 5.0kb downstream 5000 false Chr1: 220665-225664 Arabidopsis thaliana
AT1G01620 10.0kb upstream 10.0kb upstream 11638 true Chr1: 225665-237302 Arabidopsis thaliana
AT1G01620 10.0kb upstream 10.0kb upstream 10000 false Chr1: 227303-237302 Arabidopsis thaliana
AT1G01620 10.0kb downstream 10.0kb downstream 11638 true Chr1: 215665-227302 Arabidopsis thaliana
AT1G01620 10.0kb downstream 10.0kb downstream 10000 false Chr1: 215665-225664 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374214 5261 Brassicaceae View MSA
123838130 5264 Brassicales-Malvales View MSA
124349597 5266 SBM View MSA
124250285 5268 Malvidae View MSA
124069704 5270 Rosid View MSA
123745949 5271 Pentapetalae View MSA
122797491 5272 Eudicot View MSA
122048172 5273 Angiosperm View MSA
121347891 5274 Embryophyte View MSA
123428679 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 104.115     High  
cufflinks 204.337     High  
cufflinks 85.783     High  
cufflinks 179.652     High  
cufflinks 73.469     High Low
cufflinks 254.908     High High

0 Strain