Gene : MPK11 A. thaliana TAIR10
Primary Identifier:  ? AT1G01560 Defline:  (1 of 1) KOG0662 - Cyclin-dependent kinase CDK5
Genomic Order:  61 Name:  ? AT1G01560
Secondary Identifier:  ? PAC:19658274
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G01560 0.5kb upstream 0.5kb upstream 2700 true Chr1: 201636-204335 Arabidopsis thaliana
AT1G01560 0.5kb upstream 0.5kb upstream 500 false Chr1: 201636-202135 Arabidopsis thaliana
AT1G01560 0.5kb downstream 0.5kb downstream 2700 true Chr1: 202136-204835 Arabidopsis thaliana
AT1G01560 0.5kb downstream 0.5kb downstream 500 false Chr1: 204336-204835 Arabidopsis thaliana
AT1G01560 1.0kb upstream 1.0kb upstream 3200 true Chr1: 201136-204335 Arabidopsis thaliana
AT1G01560 1.0kb upstream 1.0kb upstream 1000 false Chr1: 201136-202135 Arabidopsis thaliana
AT1G01560 1.0kb downstream 1.0kb downstream 3200 true Chr1: 202136-205335 Arabidopsis thaliana
AT1G01560 1.0kb downstream 1.0kb downstream 1000 false Chr1: 204336-205335 Arabidopsis thaliana
AT1G01560 2.0kb upstream 2.0kb upstream 4200 true Chr1: 200136-204335 Arabidopsis thaliana
AT1G01560 2.0kb upstream 2.0kb upstream 2000 false Chr1: 200136-202135 Arabidopsis thaliana
AT1G01560 2.0kb downstream 2.0kb downstream 4200 true Chr1: 202136-206335 Arabidopsis thaliana
AT1G01560 2.0kb downstream 2.0kb downstream 2000 false Chr1: 204336-206335 Arabidopsis thaliana
AT1G01560 5.0kb upstream 5.0kb upstream 7200 true Chr1: 197136-204335 Arabidopsis thaliana
AT1G01560 5.0kb upstream 5.0kb upstream 5000 false Chr1: 197136-202135 Arabidopsis thaliana
AT1G01560 5.0kb downstream 5.0kb downstream 7200 true Chr1: 202136-209335 Arabidopsis thaliana
AT1G01560 5.0kb downstream 5.0kb downstream 5000 false Chr1: 204336-209335 Arabidopsis thaliana
AT1G01560 10.0kb upstream 10.0kb upstream 12200 true Chr1: 192136-204335 Arabidopsis thaliana
AT1G01560 10.0kb upstream 10.0kb upstream 10000 false Chr1: 192136-202135 Arabidopsis thaliana
AT1G01560 10.0kb downstream 10.0kb downstream 12200 true Chr1: 202136-214335 Arabidopsis thaliana
AT1G01560 10.0kb downstream 10.0kb downstream 10000 false Chr1: 204336-214335 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122380799 5261 Brassicaceae View MSA
123834465 5264 Brassicales-Malvales View MSA
124345432 5266 SBM View MSA
124238945 5268 Malvidae View MSA
124061273 5270 Rosid View MSA
123742967 5271 Pentapetalae View MSA
122787309 5272 Eudicot View MSA
122048808 5273 Angiosperm View MSA
121344775 5274 Embryophyte View MSA
123428294 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 16.485       High
cufflinks 2.825        
cufflinks 3.075        
cufflinks 2.602        
cufflinks 5.106        
cufflinks 1.872        

0 Strain