Gene : AT1G14550 A. thaliana TAIR10
Defline:  (1 of 2) PTHR31388//PTHR31388:SF37 - FAMILY NOT NAMED // PEROXIDASE 4-RELATED Genomic Order:  1454
Name:  ? AT1G14550 Secondary Identifier:  ? PAC:19651856
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana PWY-5466 Arabidopsis thaliana pathologic  
Athaliana PWY-7214 Arabidopsis thaliana pathologic  
Athaliana PWY-7445 Arabidopsis thaliana pathologic  

Genomics

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Expression

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Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G14550 0.5kb upstream 0.5kb upstream 1797 true Chr1: 4978528-4980324 Arabidopsis thaliana
AT1G14550 0.5kb upstream 0.5kb upstream 500 false Chr1: 4978528-4979027 Arabidopsis thaliana
AT1G14550 0.5kb downstream 0.5kb downstream 1797 true Chr1: 4979028-4980824 Arabidopsis thaliana
AT1G14550 0.5kb downstream 0.5kb downstream 500 false Chr1: 4980325-4980824 Arabidopsis thaliana
AT1G14550 1.0kb upstream 1.0kb upstream 2297 true Chr1: 4978028-4980324 Arabidopsis thaliana
AT1G14550 1.0kb upstream 1.0kb upstream 1000 false Chr1: 4978028-4979027 Arabidopsis thaliana
AT1G14550 1.0kb downstream 1.0kb downstream 2297 true Chr1: 4979028-4981324 Arabidopsis thaliana
AT1G14550 1.0kb downstream 1.0kb downstream 1000 false Chr1: 4980325-4981324 Arabidopsis thaliana
AT1G14550 2.0kb upstream 2.0kb upstream 3297 true Chr1: 4977028-4980324 Arabidopsis thaliana
AT1G14550 2.0kb upstream 2.0kb upstream 2000 false Chr1: 4977028-4979027 Arabidopsis thaliana
AT1G14550 2.0kb downstream 2.0kb downstream 3297 true Chr1: 4979028-4982324 Arabidopsis thaliana
AT1G14550 2.0kb downstream 2.0kb downstream 2000 false Chr1: 4980325-4982324 Arabidopsis thaliana
AT1G14550 5.0kb upstream 5.0kb upstream 6297 true Chr1: 4974028-4980324 Arabidopsis thaliana
AT1G14550 5.0kb upstream 5.0kb upstream 5000 false Chr1: 4974028-4979027 Arabidopsis thaliana
AT1G14550 5.0kb downstream 5.0kb downstream 6297 true Chr1: 4979028-4985324 Arabidopsis thaliana
AT1G14550 5.0kb downstream 5.0kb downstream 5000 false Chr1: 4980325-4985324 Arabidopsis thaliana
AT1G14550 10.0kb upstream 10.0kb upstream 11297 true Chr1: 4969028-4980324 Arabidopsis thaliana
AT1G14550 10.0kb upstream 10.0kb upstream 10000 false Chr1: 4969028-4979027 Arabidopsis thaliana
AT1G14550 10.0kb downstream 10.0kb downstream 11297 true Chr1: 4979028-4990324 Arabidopsis thaliana
AT1G14550 10.0kb downstream 10.0kb downstream 10000 false Chr1: 4980325-4990324 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122343534 5261 Brassicaceae View MSA
123836938 5264 Brassicales-Malvales View MSA
124322227 5266 SBM View MSA
124249111 5268 Malvidae View MSA
124068770 5270 Rosid View MSA
123752607 5271 Pentapetalae View MSA
122796741 5272 Eudicot View MSA
122051577 5273 Angiosperm View MSA
121351674 5274 Embryophyte View MSA
123426672 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.07     Low  
cufflinks 0.013     Low Low
cufflinks 0.084     Low  
cufflinks 0.012     Low Low
cufflinks 0.133     Low High

0 Strain