Gene : AT1G11200 A. thaliana TAIR10
Defline:  (1 of 2) PTHR23423//PTHR23423:SF15 - ORGANIC SOLUTE TRANSPORTER-RELATED // SUBFAMILY NOT NAMED Genomic Order:  1091
Name:  ? AT1G11200 Secondary Identifier:  ? PAC:19653593
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G11200 0.5kb upstream 0.5kb upstream 2777 true Chr1: 3752865-3755641 Arabidopsis thaliana
AT1G11200 0.5kb upstream 0.5kb upstream 500 false Chr1: 3752865-3753364 Arabidopsis thaliana
AT1G11200 0.5kb downstream 0.5kb downstream 2777 true Chr1: 3753365-3756141 Arabidopsis thaliana
AT1G11200 0.5kb downstream 0.5kb downstream 500 false Chr1: 3755642-3756141 Arabidopsis thaliana
AT1G11200 1.0kb upstream 1.0kb upstream 3277 true Chr1: 3752365-3755641 Arabidopsis thaliana
AT1G11200 1.0kb upstream 1.0kb upstream 1000 false Chr1: 3752365-3753364 Arabidopsis thaliana
AT1G11200 1.0kb downstream 1.0kb downstream 3277 true Chr1: 3753365-3756641 Arabidopsis thaliana
AT1G11200 1.0kb downstream 1.0kb downstream 1000 false Chr1: 3755642-3756641 Arabidopsis thaliana
AT1G11200 2.0kb upstream 2.0kb upstream 4277 true Chr1: 3751365-3755641 Arabidopsis thaliana
AT1G11200 2.0kb upstream 2.0kb upstream 2000 false Chr1: 3751365-3753364 Arabidopsis thaliana
AT1G11200 2.0kb downstream 2.0kb downstream 4277 true Chr1: 3753365-3757641 Arabidopsis thaliana
AT1G11200 2.0kb downstream 2.0kb downstream 2000 false Chr1: 3755642-3757641 Arabidopsis thaliana
AT1G11200 5.0kb upstream 5.0kb upstream 7277 true Chr1: 3748365-3755641 Arabidopsis thaliana
AT1G11200 5.0kb upstream 5.0kb upstream 5000 false Chr1: 3748365-3753364 Arabidopsis thaliana
AT1G11200 5.0kb downstream 5.0kb downstream 7277 true Chr1: 3753365-3760641 Arabidopsis thaliana
AT1G11200 5.0kb downstream 5.0kb downstream 5000 false Chr1: 3755642-3760641 Arabidopsis thaliana
AT1G11200 10.0kb upstream 10.0kb upstream 12277 true Chr1: 3743365-3755641 Arabidopsis thaliana
AT1G11200 10.0kb upstream 10.0kb upstream 10000 false Chr1: 3743365-3753364 Arabidopsis thaliana
AT1G11200 10.0kb downstream 10.0kb downstream 12277 true Chr1: 3753365-3765641 Arabidopsis thaliana
AT1G11200 10.0kb downstream 10.0kb downstream 10000 false Chr1: 3755642-3765641 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370220 5261 Brassicaceae View MSA
123837233 5264 Brassicales-Malvales View MSA
124336585 5266 SBM View MSA
124241817 5268 Malvidae View MSA
124072343 5270 Rosid View MSA
123745032 5271 Pentapetalae View MSA
122797538 5272 Eudicot View MSA
122044930 5273 Angiosperm View MSA
121344114 5274 Embryophyte View MSA
123379976 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.767        
cufflinks 10.314        
cufflinks 7.27       Low
cufflinks 9.801        
cufflinks 8.186        
cufflinks 10.986       High

0 Strain