Gene : AT1G08440 A. thaliana TAIR10
Defline:  (1 of 3) PTHR31086//PTHR31086:SF22 - FAMILY NOT NAMED // ALUMINUM-ACTIVATED MALATE TRANSPORTER 1-RELATED Genomic Order:  793
Name:  ? AT1G08440 Secondary Identifier:  ? PAC:19652533
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G08440 0.5kb upstream 0.5kb upstream 2817 true Chr1: 2662527-2665343 Arabidopsis thaliana
AT1G08440 0.5kb upstream 0.5kb upstream 500 false Chr1: 2662527-2663026 Arabidopsis thaliana
AT1G08440 0.5kb downstream 0.5kb downstream 2817 true Chr1: 2663027-2665843 Arabidopsis thaliana
AT1G08440 0.5kb downstream 0.5kb downstream 500 false Chr1: 2665344-2665843 Arabidopsis thaliana
AT1G08440 1.0kb upstream 1.0kb upstream 3317 true Chr1: 2662027-2665343 Arabidopsis thaliana
AT1G08440 1.0kb upstream 1.0kb upstream 1000 false Chr1: 2662027-2663026 Arabidopsis thaliana
AT1G08440 1.0kb downstream 1.0kb downstream 3317 true Chr1: 2663027-2666343 Arabidopsis thaliana
AT1G08440 1.0kb downstream 1.0kb downstream 1000 false Chr1: 2665344-2666343 Arabidopsis thaliana
AT1G08440 2.0kb upstream 2.0kb upstream 4317 true Chr1: 2661027-2665343 Arabidopsis thaliana
AT1G08440 2.0kb upstream 2.0kb upstream 2000 false Chr1: 2661027-2663026 Arabidopsis thaliana
AT1G08440 2.0kb downstream 2.0kb downstream 4317 true Chr1: 2663027-2667343 Arabidopsis thaliana
AT1G08440 2.0kb downstream 2.0kb downstream 2000 false Chr1: 2665344-2667343 Arabidopsis thaliana
AT1G08440 5.0kb upstream 5.0kb upstream 7317 true Chr1: 2658027-2665343 Arabidopsis thaliana
AT1G08440 5.0kb upstream 5.0kb upstream 5000 false Chr1: 2658027-2663026 Arabidopsis thaliana
AT1G08440 5.0kb downstream 5.0kb downstream 7317 true Chr1: 2663027-2670343 Arabidopsis thaliana
AT1G08440 5.0kb downstream 5.0kb downstream 5000 false Chr1: 2665344-2670343 Arabidopsis thaliana
AT1G08440 10.0kb upstream 10.0kb upstream 12317 true Chr1: 2653027-2665343 Arabidopsis thaliana
AT1G08440 10.0kb upstream 10.0kb upstream 10000 false Chr1: 2653027-2663026 Arabidopsis thaliana
AT1G08440 10.0kb downstream 10.0kb downstream 12317 true Chr1: 2663027-2675343 Arabidopsis thaliana
AT1G08440 10.0kb downstream 10.0kb downstream 10000 false Chr1: 2665344-2675343 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122362705 5261 Brassicaceae View MSA
123841564 5264 Brassicales-Malvales View MSA
124341722 5266 SBM View MSA
124254178 5268 Malvidae View MSA
124072660 5270 Rosid View MSA
123751083 5271 Pentapetalae View MSA
122790072 5272 Eudicot View MSA
122050187 5273 Angiosperm View MSA
121311787 5274 Embryophyte View MSA
123428514 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.178     Low  
cufflinks 1.391       High
cufflinks 0.066     Low  
cufflinks 0.533        
cufflinks 0.042     Low Low
cufflinks 0.997        

0 Strain