Gene : SCL14 A. thaliana TAIR10
Primary Identifier:  ? AT1G07530 Defline:  (1 of 4) PTHR31636:SF54 - SCARECROW-LIKE PROTEIN 14-RELATED
Genomic Order:  690 Name:  ? AT1G07530
Secondary Identifier:  ? PAC:19655098
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Expression

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3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G07530 0.5kb upstream 0.5kb upstream 3388 true Chr1: 2313582-2316969 Arabidopsis thaliana
AT1G07530 0.5kb upstream 0.5kb upstream 500 false Chr1: 2316470-2316969 Arabidopsis thaliana
AT1G07530 0.5kb downstream 0.5kb downstream 3388 true Chr1: 2313082-2316469 Arabidopsis thaliana
AT1G07530 0.5kb downstream 0.5kb downstream 500 false Chr1: 2313082-2313581 Arabidopsis thaliana
AT1G07530 1.0kb upstream 1.0kb upstream 3888 true Chr1: 2313582-2317469 Arabidopsis thaliana
AT1G07530 1.0kb upstream 1.0kb upstream 1000 false Chr1: 2316470-2317469 Arabidopsis thaliana
AT1G07530 1.0kb downstream 1.0kb downstream 3888 true Chr1: 2312582-2316469 Arabidopsis thaliana
AT1G07530 1.0kb downstream 1.0kb downstream 1000 false Chr1: 2312582-2313581 Arabidopsis thaliana
AT1G07530 2.0kb upstream 2.0kb upstream 4888 true Chr1: 2313582-2318469 Arabidopsis thaliana
AT1G07530 2.0kb upstream 2.0kb upstream 2000 false Chr1: 2316470-2318469 Arabidopsis thaliana
AT1G07530 2.0kb downstream 2.0kb downstream 4888 true Chr1: 2311582-2316469 Arabidopsis thaliana
AT1G07530 2.0kb downstream 2.0kb downstream 2000 false Chr1: 2311582-2313581 Arabidopsis thaliana
AT1G07530 5.0kb upstream 5.0kb upstream 7888 true Chr1: 2313582-2321469 Arabidopsis thaliana
AT1G07530 5.0kb upstream 5.0kb upstream 5000 false Chr1: 2316470-2321469 Arabidopsis thaliana
AT1G07530 5.0kb downstream 5.0kb downstream 7888 true Chr1: 2308582-2316469 Arabidopsis thaliana
AT1G07530 5.0kb downstream 5.0kb downstream 5000 false Chr1: 2308582-2313581 Arabidopsis thaliana
AT1G07530 10.0kb upstream 10.0kb upstream 12888 true Chr1: 2313582-2326469 Arabidopsis thaliana
AT1G07530 10.0kb upstream 10.0kb upstream 10000 false Chr1: 2316470-2326469 Arabidopsis thaliana
AT1G07530 10.0kb downstream 10.0kb downstream 12888 true Chr1: 2303582-2316469 Arabidopsis thaliana
AT1G07530 10.0kb downstream 10.0kb downstream 10000 false Chr1: 2303582-2313581 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368206 5261 Brassicaceae View MSA
123835350 5264 Brassicales-Malvales View MSA
124351373 5266 SBM View MSA
124246157 5268 Malvidae View MSA
124064639 5270 Rosid View MSA
123750613 5271 Pentapetalae View MSA
122790030 5272 Eudicot View MSA
122048011 5273 Angiosperm View MSA
121350999 5274 Embryophyte View MSA
123381964 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 16.496        
cufflinks 30.342     High High
cufflinks 15.245       Low
cufflinks 31.193     High High
cufflinks 17.847        
cufflinks 25.589        

0 Strain