Gene : MYB13 A. thaliana TAIR10
Primary Identifier:  ? AT1G06180 Defline:  (1 of 2) PTHR10641//PTHR10641:SF523 - MYB-LIKE DNA-BINDING PROTEIN MYB // SUBFAMILY NOT NAMED
Genomic Order:  553 Name:  ? AT1G06180
Secondary Identifier:  ? PAC:19653468
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Genomics

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Expression

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3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G06180 0.5kb upstream 0.5kb upstream 2251 true Chr1: 1888908-1891158 Arabidopsis thaliana
AT1G06180 0.5kb upstream 0.5kb upstream 500 false Chr1: 1888908-1889407 Arabidopsis thaliana
AT1G06180 0.5kb downstream 0.5kb downstream 2251 true Chr1: 1889408-1891658 Arabidopsis thaliana
AT1G06180 0.5kb downstream 0.5kb downstream 500 false Chr1: 1891159-1891658 Arabidopsis thaliana
AT1G06180 1.0kb upstream 1.0kb upstream 2751 true Chr1: 1888408-1891158 Arabidopsis thaliana
AT1G06180 1.0kb upstream 1.0kb upstream 1000 false Chr1: 1888408-1889407 Arabidopsis thaliana
AT1G06180 1.0kb downstream 1.0kb downstream 2751 true Chr1: 1889408-1892158 Arabidopsis thaliana
AT1G06180 1.0kb downstream 1.0kb downstream 1000 false Chr1: 1891159-1892158 Arabidopsis thaliana
AT1G06180 2.0kb upstream 2.0kb upstream 3751 true Chr1: 1887408-1891158 Arabidopsis thaliana
AT1G06180 2.0kb upstream 2.0kb upstream 2000 false Chr1: 1887408-1889407 Arabidopsis thaliana
AT1G06180 2.0kb downstream 2.0kb downstream 3751 true Chr1: 1889408-1893158 Arabidopsis thaliana
AT1G06180 2.0kb downstream 2.0kb downstream 2000 false Chr1: 1891159-1893158 Arabidopsis thaliana
AT1G06180 5.0kb upstream 5.0kb upstream 6751 true Chr1: 1884408-1891158 Arabidopsis thaliana
AT1G06180 5.0kb upstream 5.0kb upstream 5000 false Chr1: 1884408-1889407 Arabidopsis thaliana
AT1G06180 5.0kb downstream 5.0kb downstream 6751 true Chr1: 1889408-1896158 Arabidopsis thaliana
AT1G06180 5.0kb downstream 5.0kb downstream 5000 false Chr1: 1891159-1896158 Arabidopsis thaliana
AT1G06180 10.0kb upstream 10.0kb upstream 11751 true Chr1: 1879408-1891158 Arabidopsis thaliana
AT1G06180 10.0kb upstream 10.0kb upstream 10000 false Chr1: 1879408-1889407 Arabidopsis thaliana
AT1G06180 10.0kb downstream 10.0kb downstream 11751 true Chr1: 1889408-1901158 Arabidopsis thaliana
AT1G06180 10.0kb downstream 10.0kb downstream 10000 false Chr1: 1891159-1901158 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369872 5261 Brassicaceae View MSA
123799861 5264 Brassicales-Malvales View MSA
124349320 5266 SBM View MSA
124251193 5268 Malvidae View MSA
124069462 5270 Rosid View MSA
123753515 5271 Pentapetalae View MSA
122794930 5272 Eudicot View MSA
122045941 5273 Angiosperm View MSA
121350389 5274 Embryophyte View MSA
123381710 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.327       Low
cufflinks 11.244        
cufflinks 2.41       Low
cufflinks 13.64       High
cufflinks 4.497        
cufflinks 7.374        

0 Strain